SimpleSearch - Line and FST details


Line specific information

 
Line ID 701G05
Vector Used pAC161
Line Availability available as T3 set from NASC (N467277)
Segregation Analysis 50:43:31
Confirmed for Hit At4g00600
Parent of DUPLO pair none
Parent of pair(s) 87683

Gene hit At4g00600

 
Sequence (A. th genome BLAST matches underlined) 
>39-K025311-022-701-G05-8409
NNNTTTATGTACATTCGGACATGAAGCATTTAACAATTGAATATATCCTGTACATGGCTT
AACTGACAGCCTGTACCCGTCTGGACTTCCGGTGAATTTCAAGATGATTGCGCGCTCTTT
TTTGAAGAAACTAAGCTTAGTTAGCCTCCCTAGAAGCCAGTGATTTTTGCTTACCGTTAA
GTCAGAAATAATATTATTTCGGTTCTTGTTCTTTGATTTTAGAGGTTACCTGAGCCAGAT
TGTGACTTCCCTGATTATCTTGCTGCTTTGCTATGGCATCCTCCCTATATTGAGATTAAA
TGAGCCTCCCCATAATAAAAGTATTACTAATGGATTCCCCCCAGTAAGTGACCCTATCGT
ACCCCCCACTACTAAATTCGATAGGATTCCCCAATGAAAGGAAATACTTTAATATCTTAT
CAAAACAATTACTATCATTGAGGTGGAATAAAAAAAAAAAAAATAATTTTTCACCCACCC
CCCTCCAACTTCCCTTTCATAAAAAAAGGGGGGGGACGTATCCACACATAAAT
GenBank Accession CR356654 [GenBank]
Graphic View Graphic view of gene At4g00600
Predicted Position of Insertion Chr4:255357 - go to primer design
BLAST e Value 6e-48
Hit Clone Code (BAC ID) F6N23
Hit Gene Code At4g00600 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Amino acid dehydrogenase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR356655 [GenBank]


Last Updated on 10.06.2021 13:37