SimpleSearch - Line and FST details


Line specific information

 
Line ID 704H08
Vector Used pGABI1
Line Availability available as T3 set from NASC (N467580)
Segregation Analysis 50:42:29
Confirmed for Hit At2g36850
Parent of DUPLO pair none
Parent of pair(s) 5436, 92360, 92363, 92364, 92367, 92368
Note

Gene hit At1g78100

 
Sequence (A. th genome BLAST matches underlined) 
>64-K025035-022-704-H08-8409
CAGAGTCGGTGACTTCGAAACGTTAATATGAGGTCGTTCCGGTTTCTAAGGATGTCGCTC
GTTAGCCACTCAATCTGAGTCGCTCCTTCTCCGAGTCGATCAGATCCTCGGAGCCACCGA
ATCTGACTCCGAGATCGATTCTCCTATCGGTATGGGATCCTCCCTATAGGGAGTGCCACT
GGTCCTGCCTGTCTTGAGGGGGATCCACTGGGTCTGGGATCCTCTCGATACGTGGGGGGA
CGGATAAGATAGCTTCATAGTTCCATGAGTTGAGTAGTTTCGGCGCTCTGTGGTACAGGC
GTTGTTAGATCTTGATTTAGGGTGTTAGTAACCGTGTCGCTCAAGTCGAGCCACAGTTCC
GAGTGCGGTGTGGGTTAGTGTATTGTCGGGGAGCGCAACAAAATATCTTAGTTGTTA
GenBank Accession BX945028 [GenBank]
Graphic View Graphic view of gene At1g78100
Predicted Position of Insertion Chr1:29387946 - go to primer design
BLAST e Value 2e-41
Hit Clone Code (BAC ID) T11I11
Hit Gene Code At1g78100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box family protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 785A01

Gene hit At2g36850

 
Sequence (A. th genome BLAST matches underlined) 
>64-K025185-022-704-H08-8409
TGGTTAAGCTTTTTCAAAAACTAGAACGTTAGACGTTCAAAAAGAACTTATTAAGTTTAA
AACAGCAATCAGGAATTTAAATATATATAGCACCAATCTACTACGCATACCAGCATATAT
ATCTTCACTGATGTTAATAACACGGGATGCTTTGCTGATTCCTCCGCGAGTTATATGAAA
TATTCTATCGAACACATCTGGATGCCCATAGTGCATTCGAACTCTGCAAGATTAGTTTTG
AACAAATTGAAACTAAGCTGTCACTGGAAAGTGGTAATAGATTAAATAAAAACAATCCAA
TAAACCGGAAAACGAG
GenBank Accession CR356858 [GenBank]
Graphic View Graphic view of gene At2g36850
Predicted Position of Insertion Chr2:15457616 - go to primer design
BLAST e Value 7e-165
Hit Clone Code (BAC ID) T1J8
Hit Gene Code At2g36850 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glucan synthase-like 8
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37