SimpleSearch - Line and FST details
Line specific information
| Line ID | 709G06 |
| Vector Used | pGABI1 |
| Line Availability | available as T3 set from NASC (N468046) |
| Segregation Analysis | 50:50:22 |
| Confirmed for Hit | At1g33030 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 5134 |
Gene hit At1g33030
| Sequence (A. th genome BLAST matches underlined) | >47-K023075-022-709-G06-8409 TTGAAACAATGAATAATAATTCTTTGCTTTTTCATATTGGTTTTGATTTTATAATATTCT TTTGAAGTATTCATACAATAATTTCTAAAGAACTACAATGGTTTTGATGGTGTGAAGTCT TTGGTTGATGTTGGTGGTGGAGATGGCTCTCTTCTCAGAAGAATCATCTCTATGCATACT CACATTATCAAAGCTATTAACTTTGATTTGCCCACTGTTATCAACACTTCATTACCTTCT CCAAGTATGGGATCCTCCCTATATTGAGCCCTCAAAATCCCGGTCCTTTCACAATTCAAA AGAAA |
| GenBank Accession | BX662940 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:11965646 - go to primer design |
| BLAST e Value | 2e-88 |
| Hit Clone Code (BAC ID) | F9L11 |
| Hit Gene Code | At1g33030 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | O-methyltransferase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T2I1
| Sequence (A. th genome BLAST matches underlined) | >47-K022966-022-709-G06-8409 TACTTAATATTCTATGGTCACAGAGCTGNACGAATCCATAACTGCCTNCACTCTAACTCT TGACAGCACGAGCAATAAATCGNATGTGCNCAGCTCTGCGAGACCGTCTGAGAACTCTAC GGCANCTAATACTATATCATGAGCTCGCTCTCAGCTANGATCATCTCCTCTACATACACC GCAAACGNTGACGAATTTCATGTTGTCGTCGCGTCTATGCACAGTCAGTACTACTCTTGT AGAAGATAACACTACGCCTGTATATCTCATATTACTTAATGACATAGACANCTCGCNCAT CGCCATCTTCTCGCACTACACTCTCGTCACTAGCTCGGTGGACNGTCACTATAGCTGGTG CACTATACTGCTAGACAGCATATCGCATTGCGACTACATGCGACTCGNCACATAANGNAT GCGATGTCGCGCNACATGCGACCACGAAGCGACTCTGACATNACACAAGAGCTGTACTGA GTCATCTTAACTGAGCAGCTANATATACTCGTGTTCGACTTCTCGTGACCATAGACTGAT CGCTCCTCACGTTCTTCGTCACCTATAGCGCTGCGCACATGTGAGCCTCATACCACGCGT GCTCNTACATGCGCGTGCTCATACTCANTACTANTCGTAATCTAGTGTATNGATATTACG TAACTGTATGTATTAGTCTGCACACATCTCATATCCATGACGCAAACGATGTGCACNATA AGCTATGATCNTGTGCACATACCATCTTGCATAATAGACTATCATCGCTACCTTGGTGCT ACACTCAACGCTCTCACATGACACGTNACAGTCTACCAAGTGATATCTCACTATGCTNAT TAACGATCATACTCGCTGCGCNCTATACGCAATNANCGATTATTGGTAATCTACAGTGAT ATACTAATATCACNTCACACATACAGTCTCACGATCTNATGTGGTCGCACGGCGAAAATA GATCGCTCCGCCACTCATACTCNACTAACAGCTCATAGGACTCTTATGACTTCACACGCA CTCCTGTTGCATATGTTACCTCATATCCATACCAGTACTCTCACCTCGAATGTCACCGCT GGTGTTCACTAGACCTCACTATCCCAACACTGACAATGTCTNANCTTNACTTCACTCTAT GACCAGTTACTGTGCGAGAGCACTCTCCGACACTCCCTAGTCTACTAGACCTACCTGAGT NCTATACACTACGTCACTCGTGATCGAACACATACTGTTC |
| GenBank Accession | FR814871 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:2389743 - go to primer design |
| BLAST e Value | 6e-04 |
| Hit Clone Code (BAC ID) | T2I1 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
