SimpleSearch - Line and FST details


Line specific information

 
Line ID 714C03
Vector Used pGABI1
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 59664, 92878

Gene hit F18A8

 
Sequence (A. th genome BLAST matches underlined) 
>19-K025038-022-714-C03-8409
CCGGAATGAAGCCATTTACAATTGAATATATCCTGAAACGGAATTCTGGATTGTCTCTCA
TCCACAAATAGCCAGCAAGGGTATGGGATCCTCCCTATAGTGAGANNGNNNNNNNNNNNN
TGNNTTTCTTGAATANNNNNTTGATGAGTCTTTCNTATACNTTANTCTAAGAGAAATATT
TGGGTTAACTCTTGCATTCATCTCCTTTAATTTAAGCCAATCATTATATCATATCATATA
ATAATAATAAAAACAAAATTTATATAATTTTAAATTTTAATTAAATTAGATTAATTATAT
ATAGAATTTAGACTTTACAATTAAACAAAATTATATGTTAGTTTGAGTTTATATTATAAA
TATTAGATTTAGATTTTAAAATTAATAAAAATTATATGTCGTTTTGGATTTATAAAAAAT
GTGATTAAAATTGAGATTTCCAATTAAACAAAATTATTTGTTTATTTGGGTTTAAAAAAG
TAGATTAGAGTTTAAATTTTACAATTAAACAAAATTATATGTCAGTTTGAGTTTATAAAA
GAGTATTTAAGATTTACATTTTACCATTAAATAAAATTATATGT
GenBank Accession BX945321 [GenBank]
Graphic View Graphic view of sequence BX945321 of line 714C03
Predicted Position of Insertion Chr2:11394743 - go to primer design
BLAST e Value 6e-76
Hit Clone Code (BAC ID) F18A8
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g58270

 
Sequence (A. th genome BLAST matches underlined) 
>19-K025109-022-714-C03-8409
TCATTGAATATATCCTGAAACGGAATTCTGGATTGTCTCTCCTCCCCAATAGCCCGCCAG
CGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX945322 [GenBank]
Graphic View Graphic view of gene At5g58270
Predicted Position of Insertion Chr5:23562593 - go to primer design
BLAST e Value 9e-07
Hit Clone Code (BAC ID) MCK7
Hit Gene Code At5g58270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ABC transporter of the mitochondrion 3
Insertion Classification CDSi
Confirmation Status unknown
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37