SimpleSearch - Line and FST details


Line specific information

 
Line ID 714C03
Vector Used pGABI1
Line Availability available as T3 set from NASC (N468475)
Segregation Analysis 50:50:43
Confirmed for Hit At5g58270
Parent of DUPLO pair none
Parent of pair(s) 59664, 92878

Gene hit F18A8

 
Sequence (A. th genome BLAST matches underlined) 
>19-K025038-022-714-C03-8409
CCGGAATGAAGCCATTTACAATTGAATATATCCTGAAACGGAATTCTGGATTGTCTCTCA
TCCACAAATAGCCAGCAAGGGTATGGGATCCTCCCTATAGTGAGANNGNNNNNNNNNNNN
TGNNTTTCTTGAATANNNNNTTGATGAGTCTTTCNTATACNTTANTCTAAGAGAAATATT
TGGGTTAACTCTTGCATTCATCTCCTTTAATTTAAGCCAATCATTATATCATATCATATA
ATAATAATAAAAACAAAATTTATATAATTTTAAATTTTAATTAAATTAGATTAATTATAT
ATAGAATTTAGACTTTACAATTAAACAAAATTATATGTTAGTTTGAGTTTATATTATAAA
TATTAGATTTAGATTTTAAAATTAATAAAAATTATATGTCGTTTTGGATTTATAAAAAAT
GTGATTAAAATTGAGATTTCCAATTAAACAAAATTATTTGTTTATTTGGGTTTAAAAAAG
TAGATTAGAGTTTAAATTTTACAATTAAACAAAATTATATGTCAGTTTGAGTTTATAAAA
GAGTATTTAAGATTTACATTTTACCATTAAATAAAATTATATGT
GenBank Accession BX945321 [GenBank]
Graphic View Graphic view of sequence BX945321 of line 714C03
Predicted Position of Insertion Chr2:11394743 - go to primer design
BLAST e Value 6e-76
Hit Clone Code (BAC ID) F18A8
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g58270

 
Sequence (A. th genome BLAST matches underlined) 
>19-K025109-022-714-C03-8409
TCATTGAATATATCCTGAAACGGAATTCTGGATTGTCTCTCCTCCCCAATAGCCCGCCAG
CGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX945322 [GenBank]
Graphic View Graphic view of gene At5g58270
Predicted Position of Insertion Chr5:23562593 - go to primer design
BLAST e Value 9e-07
Hit Clone Code (BAC ID) MCK7
Hit Gene Code At5g58270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ABC transporter of the mitochondrion 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37