SimpleSearch - Line and FST details


Line specific information

 
Line ID 724A11
Vector Used pGABI1
Line Availability available as T3 set from NASC (N469419)
Segregation Analysis 50:50:30
Confirmed for Hit At5g03070
Parent of DUPLO pair none
Parent of pair(s) 40689, 83516

Gene hit At4g37235

 
Sequence (A. th genome BLAST matches underlined) 
>81-K025363-022-724-A11-8409
TGAAAATATTTGTGTGCAGAAAGTGCTATGAATATGGATCACTTGGCTGTGCTTTAATTA
ACATGGAGAAGAAGAAAGAGTAATTACCAATAAAGGGGATGCGAACGAATAATCCTAATA
CTTTGTGACTTATGGCGTCCGCCATCTTGGCCTGCAATTTATCCTCGGCACACTCAATTT
TTGACAGAGAAGAACAGTAGATTCTGATTGTACTCAAAATATAAAGAT
GenBank Accession FR815037 [GenBank]
Graphic View Graphic view of gene At4g37235
Predicted Position of Insertion Chr4:17519053 - go to primer design
BLAST e Value 4e-06
Hit Clone Code (BAC ID) AP22
Hit Gene Code At4g37235 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Uncharacterized protein family (UPF0497)
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At5g03070

 
Sequence (A. th genome BLAST matches underlined) 
>81-K025362-022-724-A11-8409
TGAAAAATTGTGTACAAACAACATGCTACTTATAAGTATAACCTAGGATGACGACCTGGT
GCACTCCGTATGGGATCCTCCCTATGGCGAGAGGACTTCACCGGACTACTATATTGAGTC
CCTTCTATTAAAGGCGGAACCATCATATCCCATTGAAGAAGCTTGACCTCAGCAAGTTTC
TTCAAGAGTATGGTTTTTGATTCGGTAATTTCACCGGAGTAAGAATAGGATTTCGCCGAA
AACGAATTGGTTAATTTGGATCCGTTCCCTCGCGCCCGCCCAGCAAAAAAAAGAAACACG
AAAATTTTGCCGACTCATATTTGCATATAATTTCATATTAGTCCCTAGTATTTCCAAGTA
TACAATAAATAGCCCATTTAACTTTATTACCAATTTCCGAATGGATCAACGATCGTGGTT
TCACGAAGTCTTTGACATTCGCCTATGTTGCAAACTAAAATAA
GenBank Accession CR358029 [GenBank]
Graphic View Graphic view of gene At5g03070
Predicted Position of Insertion Chr5:721228 - go to primer design
BLAST e Value 1e-159
Hit Clone Code (BAC ID) F15A17
Hit Gene Code At5g03070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation importin alpha isoform 9
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37