SimpleSearch - Line and FST details


Line specific information

 
Line ID 737G08
Vector Used pGABI1
Line Availability available as T3 set from NASC (N470736)
Segregation Analysis 50:49:32
Confirmed for Hit At5g19080
Parent of DUPLO pair 12611
Parent of pair(s) none

Gene hit At4g11410

 
Sequence (A. th genome BLAST matches underlined) 
>63-K023958-022-737-G08-8409
TCCGCGAAGNAGCCATTTACATTGAAGCCATTCACGAGATTCTTCANTGCCTTGTTTTGA
GAACAGAGCATGGGCACCTTGCAAAAGCTCTCGGAAAAAGAAATTTTATAATTGGTCCAC
TTTACTAGGGTGTGTGTTTGATCCTCCTCTACCGTTGGGTGGGTTGAAATTACACCTTAC
TTTTGTGTGATGGAAACCTCCCTATAGTGAGGTGGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX895128 [GenBank]
Graphic View Graphic view of gene At4g11410
Predicted Position of Insertion Chr4:6947366 - go to primer design
BLAST e Value 2e-51
Hit Clone Code (BAC ID) F25E4
Hit Gene Code At4g11410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAD(P)-binding Rossmann-fold superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At5g19080

 
Sequence (A. th genome BLAST matches underlined) 
>63-K023553-022-737-G08-8409
TAACTTGGTATGAAACAGGAGAGTAATAACGTTGATTCATTTGCTAACTAGCTTAGTAGT
TCCGAACCATTAAATGAACTACAATAACTCCTAAAATCAATCAGTTATGTAACTGAAGCC
TGTATTGTTTGGTTTCTGAACCAATCACATATTCATCACCTACATCATGTCAAATTTTAA
CCTTTTTCATCCCAAATTGTGGCAACACATAATTCAGAACTGAAACATGAGTAAAGATGT
TTCCTTTTAATCAATCTCGTCCCAGCAAAAACCCTAACTTTCACTGAATAAATGAGTCAT
ATCATGTAAAGTTTGAACCTTTACGATCCAAATTTGAGATTCAGTATAATCTACAAGACC
CCTCTACGCTAATTAGCCAATCTCATTCAAATTCTGGTTCTAAAGTCGGAAACTTGACTC
AAATTTTGGAGTGAAGAAGTTATACCTGCCATCGAATAAGGCATCGAAGACGAAGGAAAC
AAAATAATGACCAGGGTTAAGATCGTCAGCTACGAGCCTCACCGTAGTATTATTCA
GenBank Accession BX895127 [GenBank]
Graphic View Graphic view of gene At5g19080
Predicted Position of Insertion Chr5:6379348 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T16G12
Hit Gene Code At5g19080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37