SimpleSearch - Line and FST details


Line specific information

 
Line ID 747B10
Vector Used pAC161
Line Availability available as T3 set from NASC (N471638)
Segregation Analysis 50:50:39
Confirmed for Hit At3g10810
Parent of DUPLO pair 12177
Parent of pair(s) none

Gene hit At3g00510

 
Sequence (A. th genome BLAST matches underlined) 
>74-K024638-022-747-B10-8409
TCACCCAAACTCTCCTCTATGAGTGATTCAATTCTCATAAGTCATAATCGTGAACTTTTA
CATCAAAGGCTTGCCAAGACTTGAAGTCTGTGTATGTAATGTAACTATAGACATCTCCCT
ACAGTGCACCAGATACAGACAAGACTTCAATACCCTCACTATGGTATCCTCCCTATAGTG
AGACCACCAACCAAAAGGCCTTCTCCCTCTGTTTAGAAAAAAAGGTTCTCCTACAACGCT
CAATCACGTGACTTTTCTCAACTCTTAATACCCAAGCCAATCGCATCATCCCTCTATTGC
GACTTGAGCATATAACCCCAAAGAGGACTTTATCATACTACTTATGAGTTTGAATAAGCC
CATTAAATTTTTATTCTTTTTTAATTATAAAAATAACTCTCTTATGAACTTAGAAAAACA
ACTCAGAACCGAAACAATCTTCATCCTTCTATCGCCTTCACATATGGGATCCTCCCTATA
TTAGAGACNTAAAAACTGGACATTTTGAGCTACCAATTCCGTG
GenBank Accession BX945964 [GenBank]
Graphic View Graphic view of gene At3g00510
Predicted Position of Insertion Chr3:10928043 - go to primer design
BLAST e Value 4e-46
Hit Clone Code (BAC ID) MLD15
Hit Gene Code At3g00510 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation novel transcribed region
Insertion Classification TS2TE
Confirmation Status unknown

Gene hit At3g10810

 
Sequence (A. th genome BLAST matches underlined) 
>74-K024592-022-747-B10-8409
AGCCATTTAAATATCCTTGATTTGCGGGAAACTTCCTTTTTGAAGTGCTACAATTCCCAG
GAGGAATCACTGTGAATTCTCCACCAAATGCTTGCCCTCTGCGAAAATTCAGGATGGTTT
GCAACTTTACCCTAAACTACTCTATTCACCAGATACAGATAAACTTCAATACCCTTGCTA
TGGGATCCTCCCTATAGTGAGACGTATTACTCCCTGGCTTACCCGGACTTGGTGACCCAA
CGGGATACCCTTTATAGGAACCCCCATGGGTTAACCCTTCTCTTAAGAACAGGGACTATG
CTCTAAAGGAATACCTGTGAAACCACGACAAAAGGCTTTCCCTCTTAAAAAAAAGCAGAA
GGTAGTCGCCCTAAGACCAAGAACACTCTATTCAACGAAGAAGAAAAAAATTCCAAAATC
NTTNCCANGGGGAAAACCCAATTNNCCNAGATGCAAGGGTACCCTCCCAATGGGGCTGAG
ATTAGGCCAAAATATAAAGTCAAATACGTAAATACTGACAGTTGGAACTAA
GenBank Accession BX945963 [GenBank]
Graphic View Graphic view of gene At3g10810
Predicted Position of Insertion Chr3:3383032 - go to primer design
BLAST e Value 6e-48
Hit Clone Code (BAC ID) T7M13
Hit Gene Code At3g10810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation zinc finger (C3HC4-type RING finger) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37