SimpleSearch - Line and FST details
Line specific information
| Line ID | 756D01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N472517) |
| Segregation Analysis | 50:41:41 |
| Confirmed for Hit | At4g21680 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 6285, 6339, 6354, 91341 |
Gene hit At4g21680
| Sequence (A. th genome BLAST matches underlined) | >04-K023801-022-756-D01-8409 CGGACAGAAGCCATTTACAATTGAATATATCCTGTGAAGCCATTATGCGCGCTATGTAAT GGCTTCAATATCTCGTTGGGAACTATGTAAGACAGTTTGTTAGTTTCCATTGTCTTGAAG ATCTCTACTACAGATGATGTGCATGAGCTGGATTCCTGAAAATCTCAACAAAGGACACTT GGAGAGATTCTACTTCCTTTTAGCTGGTCTAACCGCTGCTGATTTCGTGGTTTACTTGAT TTGTGCCACATGGTACAAGTATATTAAATCTGAAGCAAGTTTCTCTGAGTCCGTAACTGA AGAGGAGGAAGTCTGAGTCATGACCTATGGGATCCTCCCTATATTGAGACA |
| GenBank Accession | BX896442 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:11517812 - go to primer design |
| BLAST e Value | 3e-127 |
| Hit Clone Code (BAC ID) | F17L22 |
| Hit Gene Code | At4g21680 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NITRATE TRANSPORTER 1.8 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g24650
| Sequence (A. th genome BLAST matches underlined) | >04-K023796-022-756-D01-8409 CGTATTTCCGCACATGAAGCATTTACAATTGATCACCCGGGCAAATTGCCCTATGGGATC CTCCCTATAGTGAGTCTTATTGCTCCCGACGATTACCATGATTTTTACTATACTGGTGCA TTAGGATCCCGATGCTCACATATACGAATAGTCCTGTAACTCAAGAATCTGTTAGTTCGC GTTTGCTACATTATTCTTATATTTATTAATGATATTGCTAATTCCGGAATCGTGAGGAAA TTCATAACTTGCTTGCAATATCGCTCTATACTTGACTGTTACAACTTAGATTAGACCCTT TCTTGGACCCCTCTTTCGTTCGAGAAGCTTACACTCCCCTATAGAGATGACATTGTACTT ACAAATACACTCATATACATTATTCCAGACAGTTTGAGCTACCAATTCATGGTATCCCAT TAAATCCCCGATTCCTCTTTGGGCAATTTTCCAAAAGCCCACTATATATCCATCTTCCCT AATATCGAAATCCACCGATTCAACATATCATTAA |
| GenBank Accession | FR815382 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:10486883 - go to primer design |
| BLAST e Value | 6e-05 |
| Hit Clone Code (BAC ID) | F25P17 |
| Hit Gene Code | At2g24650 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | B3 domain-containing protein REM13 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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