SimpleSearch - Line and FST details


Line specific information

 
Line ID 756G03
Vector Used pAC161
Line Availability available as T3 set from NASC (N472555)
Segregation Analysis 50:49:47
Confirmed for Hit At1g48210
Parent of DUPLO pair none
Parent of pair(s) 361, 5795, 5809, 10437, 83888, 83893, 83903, 83904, 83905

Gene hit At1g48210

 
Sequence (A. th genome BLAST matches underlined) 
>23-K023801-022-756-G03-8409
TTTACATTGAATAGTTCACTCCAAAGCTGTTGGCAACGTATTAGATCTCACAATATGCTT
TCCTCTCATTGTTTCAATAATGCGTAAAAGATTTAACTTAAGTGTATAACTTATAACACC
ATTTTATCTTGTGAGCGCTGACATTAGAACCAACGTAGCGAAACAAAACAAGTGATAAGC
GCATTCATCTACATGATTGAAACATTTCATGAGTCTGATTTTATTTGCCATATGGTGTGA
TATAATGATCAGCTATGGGATCCTCCCTATAGTGAGACNTATTANTCNTNNNNTTTTNTA
TNTTTTTTTTTNNTTTTNNTNTNNNNNTTTNTNNNNTTTTTTNTTTTNTTNNNTTNTTTT
TTTTTNNTTTTTTTTTTTTTNNNNTTTNNAAAGATACCAAGTTCACCTTCAGATTGGGCT
GAGATTATGCGAAAATATACACTCATATACATAAATACGGACAGTTTGAGCTACCAATTC
AGTGTAGCCCATGAAAAAAACGACCCCCTATAGGGAAGAACCAAGACA
GenBank Accession BX896490 [GenBank]
Graphic View Graphic view of gene At1g48210
Predicted Position of Insertion Chr1:17801431 - go to primer design
BLAST e Value 2e-106
Hit Clone Code (BAC ID) F21D18
Hit Gene Code At1g48210 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX896490 [GenBank]


Last Updated on 10.06.2021 13:37