SimpleSearch - Line and FST details


Line specific information

 
Line ID 757D05
Vector Used pAC161
Line Availability available as T3 set from NASC (N472617)
Segregation Analysis 50:34:28
Confirmed for Hit At1g11260
Parent of DUPLO pair none
Parent of pair(s) 6147, 6186, 6196, 6204, 6213, 6217, 6239, 7750, 8829, 77111, 77112, 77113, 77114
Note

Gene hit At1g65590

 
Sequence (A. th genome BLAST matches underlined) 
>36-K023797-022-757-D05-8409
AGCCATTTACAATTGAATATATCCTGCAGGTAATGACAAAAGCTTTACGCCTAATGTCAT
TACAAGTTACAATCATCTCATTATTACCACAATCAAAGACAAATCAATTGTCTTTATCTT
TAACAAAAAAAAAACCATTTGCCCCAATGGGTAAAAAATTGAACCCCCTTTTTTGGAAAA
GGCCATTTTCCCAAAGGTTGCAACAGGGGGGGGGGGTGCCTTTATTACACATCCCCTTCC
ATGTCCAGAGAAAAGAGGCGACCACAGAGGAAAACACAAAAAAAGAGGGTACCAAAAGAA
AGTAGTCAAGGAAAAAAAAAGAATACAACAAGAAGAATGGAAAAGAGTCACAAATGACAA
ATCAGGTACAAAACCAAACCAACTGAATGAAACCAACAAATAAACAGGAGAATGAA
GenBank Accession BX896548 [GenBank]
Graphic View Graphic view of gene At1g65590
Predicted Position of Insertion Chr1:24386400 - go to primer design
BLAST e Value 2e-35
Hit Clone Code (BAC ID) F5I14
Hit Gene Code At1g65590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation beta-hexosaminidase 3
Insertion Classification CDSi
Confirmation Status failed

Gene hit At1g11260

 
Sequence (A. th genome BLAST matches underlined) 
>36-K023930-022-757-D05-8409
GAGCCATTTACAATTGAATATATCCTGACAAGAAAGTTCGGACGGCGGCTCTCGATGCTC
TTCGGCGGAATACTCTTCTGCGCCGGAGCTCTCATCAATGGTTTCGCCAAACATGTTTGG
ATGCTCATCGTCGGTCGTATCTTGCTTGGTTTCGGTATCGGTTTCGCTAATCAGGTCCGA
CATTATTAAACCTTAATTTTAATTGCGGTGGATTATATCAATAATAACCTACAATATTGT
GTAACAAAGATATCTGAATCCATTAAAATAAGAAAAATAACAAAAAACCTTATAATATAC
TTAAAAAAATTTAAAATATATTCAAAAACTAAAATATACACCACTCAAACGAACACGAGG
ATAATAAGTAGACCACCCCCCAAACCACATAACTCTTTGAATACCAAAAAACATATATCT
CATCACAAGAACAAGAAAAGCGCAAACAATAAAAAAAAACAAACGACTCCATCACAACAG
ATTACAATAACAATAAAACGCACCATAACACAACTACGTACATATTAAATCATCTAATAG
AAGACAATACTGTAAAG
GenBank Accession BX896549 [GenBank]
Graphic View Graphic view of gene At1g11260
Predicted Position of Insertion Chr1:3778074 - go to primer design
BLAST e Value 3e-87
Hit Clone Code (BAC ID) T28P6
Hit Gene Code At1g11260 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sugar transporter 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37