SimpleSearch - Line and FST details


Line specific information

 
Line ID 760E07
Vector Used pAC161
Line Availability available as T3 set from NASC (N472919)
Segregation Analysis 50:46:45
Confirmed for Hit T10O24
Parent of DUPLO pair none
Parent of pair(s) 1933, 4720, 4727, 8505, 8507, 91954

Gene hit At1g14510

 
Sequence (A. th genome BLAST matches underlined) 
>53-K024639-022-760-E07-8409
CCGGTTGTGAGCTAGTTGTGAGGCCTTCGAAGGCACAGCGTACTACATATGTGTTTTTGT
GCAGCCTCGTTCTTCTGAATCTCACACTAGAGCTTCAGAGATGTCCCCTCTCGCTTGATT
AGAAGATGAGAGCGGAGATGAGGATGAAGATGACGAGCAAGGTGCTGTTTGTGCTGCGGG
TGACGACAAGTAAGGAGGACATGAGTTCTGGATATGTTGTGATGCTTGCGAGAAATGGTT
CCATGGGAAATGCGTGAAGATCACACCAGCAAAGGCTGAGCATATCAAACATTACAAATG
CCCAAGTTGCACTACCAGCAAGAAAATGAAAGCCTGAAAGTGATAATAACATTAGAGCCT
GTGAAAGAGGAAAACGTTTTCACAGTTTAAGAAGACAGTACAAGAGTTTAGCTGTGGGAA
GAAGAAGAAACAAAAGGCTTCTGATTGCGTANTTTTAATGGCACTGAGACAGCTTACAGT
TAGTGAGGTCTCTTTCACATTTCATTTCGTTATTATTGAGGAAAAAGGAAAA
GenBank Accession BX946275 [GenBank]
Graphic View Graphic view of gene At1g14510
Predicted Position of Insertion Chr1:4962498 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F14L17
Hit Gene Code At1g14510 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alfin-like 7
Insertion Classification CDSi
Confirmation Status unknown

Gene hit T10O24

 
Sequence (A. th genome BLAST matches underlined) 
>53-K024594-022-760-E07-8409
GCGCGGATCCAAATTTTAATGTGGACGTCAAATCCTTTGATTTTAATATTATTGGTCCAC
TTACGTCTTCTTCGTTTTATTATAAGAGGAGAGGGAAAAAAAAAAAAAAAAAGAGGTGGA
AAAAAAAAAAAATTTTGAGGGAAACCCCAAAAAAGGGGGACAAAAGAGCGGGGTATGAAT
TCCGAAAAGAAAAC
GenBank Accession BX946274 [GenBank]
Graphic View Graphic view of sequence BX946274 of line 760E07
Predicted Position of Insertion Chr1:3444743 - go to primer design
BLAST e Value 3e-19
Hit Clone Code (BAC ID) T10O24
Insertion Classification Genome Hit
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37