SimpleSearch - Line and FST details


Line specific information

 
Line ID 762C06
Vector Used pAC161
Line Availability available as T3 set from NASC (N473086)
Segregation Analysis 50:50:50
Confirmed for Hit At1g64190
Parent of DUPLO pair none
Parent of pair(s) 52989

Gene hit At4g36770

 
Sequence (A. th genome BLAST matches underlined) 
>43-K023562-022-762-C06-8409
GAAGCCATTTACATTGAATATATCCATGTCCATATGAAATTCAACACCGTGGTGTCGCAC
ATATGAGATTAGGTCCGCAGATGAGACAAATCCCATCCTGTTGACGTGTGTGCCAGAATC
ACCTCTTGTGCCGCCCGTGTGCGGACCCCCACCCCAATGTCTTTCGCCCGAGCCATCGGA
TTCTCCCGATAGAGAGACTTATGCACCACCACCCGAGCCTCCGAATTCCGGATCACGGAT
CAACCTTCTTACAATATCCCCTGGGTCCTCTGGGACACCTATGATATCCTCCCAATTTAG
AAAAACTTATTACGATAAGGCTATGGGATCCTCCCTATAATGA
GenBank Accession FR815462 [GenBank]
Graphic View Graphic view of gene At4g36770
Predicted Position of Insertion Chr4:17330464 - go to primer design
BLAST e Value 6e-05
Hit Clone Code (BAC ID) AP22
Hit Gene Code At4g36770 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation UDP-Glycosyltransferase superfamily protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g64190

 
Sequence (A. th genome BLAST matches underlined) 
>43-K023552-022-762-C06-8409
TAGGGCTTTGTCTTCAATTCGCCGCCAATGGGATCCTCCCTATAGTGAGCATCGCACTAT
CCCGAATCGCACTATCCCACTATCCTGAATATACTCATACTCATCATCGCACTATCCCGA
ATCGGTCTCGCCGGACTCGCCGTGATGGGCCAAAACCTCGCCTTAAACATCGCCGAGAAA
GGTTTCCCAATCTCAGTCTACAATCGAACCACTTCCAAAGTCGACGAAACCCTATGGGAT
CCTCCCTATAGTGAGACNTATTACTCACGGGNCTATGCTTAATTGGTAACCCAAGATACC
CATTTCATCTTCAGATTGGGCTGAGATTATGCGAAAATATACACTCATATACATAAATAC
TGACAGTTTGAGCTACCAATTCAGTGTAGCCCATT
GenBank Accession BX896821 [GenBank]
Graphic View Graphic view of gene At1g64190
Predicted Position of Insertion Chr1:23827109 - go to primer design
BLAST e Value 8e-66
Hit Clone Code (BAC ID) F22C12
Hit Gene Code At1g64190 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 6-phosphogluconate dehydrogenase family protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37