SimpleSearch - Line and FST details


Line specific information

 
Line ID 763H12
Vector Used pGABI1
Line Availability available as T3 set from NASC (N473248)
Segregation Analysis 50:50:39
Confirmed for Hit At1g17140
Parent of DUPLO pair none
Parent of pair(s) 8993
Note

Gene hit At1g17140

 
Sequence (A. th genome BLAST matches underlined) 
>96-K023869-022-763-H12-8409
AGCCACTTAAATTGAATATATCCTCGCCGCCGCTTGCCGCTTTGCACCCGCGTGGAAGCT
TGCACTGTTCGGTTTCCACCTGATAACAGGTTGCATAGTTTTACACCTGAAGGTCCGGTA
GACGAACTGTACTGATGCTCGCGGCTATGCGAATCCCACCCGTAGTAGTGAGCAGGGTGA
ACCTTAGTGCATCCATGATGGTGACGTTTTATAACCTCCATCCCGTCGAGATGTGCGTTG
CAGAGAGACATCAGTCCCATCCGATGACGATCATCTCGACCACACCGGGTCAGGCTGCGC
AACACGAGACGCAAACGTATTTGAGACGCCTGTATGGGCATCTCCCTTATAGTGAGNACA
GTATAGTTGTCCAACCCTGAGAACTTATAAACTTTATTTTAATGTTCGTTTGCTACCTTT
TATAA
GenBank Accession FR815484 [GenBank]
Graphic View Graphic view of gene At1g17140
Predicted Position of Insertion Chr1:5857821 - go to primer design
BLAST e Value 4e-12
Hit Clone Code (BAC ID) F20D23
Hit Gene Code At1g17140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation interactor of constitutive active rops 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g60960

 
Sequence (A. th genome BLAST matches underlined) 
>96-K023909-022-763-H12-8409
GNAGCCATTTACATTGAATATATCCTGCCAAAACACAAGCTTCATCGAATCTTTTAGCAT
CAACCAAGGCTTTCGCGAGTATCATGTATGTCTCGATCCCTGGAGCTACACGTCCGTCGA
GCAAAATGTGACGGTAGAGCTCAAGAGCATCGTCGACGTGACCTTGGTCGCAGTGTGCTT
TGATGATGAGATCGCAGGAGAGCGTGTTTGGAAGAGTCTGAGACTCGTTGAAAAAGTAAT
TGAACAGAGAGATGGCATCGTCGTATGGGATCCTCCCTATAGTGAG
GenBank Accession CU589935 [GenBank]
Graphic View Graphic view of gene At3g60960
Predicted Position of Insertion Chr3:22536276 - go to primer design
BLAST e Value 1e-132
Hit Clone Code (BAC ID) T27I15
Hit Gene Code At3g60960 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Tetratricopeptide repeat (TPR)-like superfamily protein
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37