SimpleSearch - Line and FST details


Line specific information

 
Line ID 770G09
Vector Used pAC161
Line Availability available as T3 set from NASC (N473905)
Segregation Analysis 50:48:47
Confirmed for Hit At3g13300 At3g01310
Parent of DUPLO pair none
Parent of pair(s) 12700

Gene hit At3g13300

 
Sequence (A. th genome BLAST matches underlined) 
>71-K023591-022-770-G09-8409
ACCTTTACATTGAATATATCCTGCAGAGGTCTGAAATTGGGCTTGAATTTGCCTATGGGA
TCCTCCCTATAGTGAATCTAATCACTCATAGTCTTTACAGATAAATTGTTACTACCAAGG
GTTCCATCACTATAGGGAGTAGATCCGGCGTTTCCCTTACCATTGAGAAGCTTTTCCCCA
ATTGTCTCTAAATTTCTCTCACAATGGAATCTGAAAAAACTCTGTCCTTGAAAAAAATAC
GAATTTCTTGATTTGTGGCATTACTGATGGCGCAATGATACCTTCGCTATCTTCAGTAAT
TGGAGTCGTATGACTCCTAAAATTGTCGTAGATTGAACAACCGCAATAATGAAAATAATA
ATGTAAGATGGAAAAACACCACTGTAGAAGTATTATAATTCTCCTATTTTATAATTAAAT
GATACCGTGAAAACAAAAAGATGAAATTCAATGAACCTAACTTAATAGAAAT
GenBank Accession BX897637 [GenBank]
Graphic View Graphic view of gene At3g13300
Predicted Position of Insertion Chr3:4308465 - go to primer design
BLAST e Value 4e-09
Hit Clone Code (BAC ID) MDC11
Hit Gene Code At3g13300 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transducin/WD40 repeat-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At3g01310

 
Sequence (A. th genome BLAST matches underlined) 
>71-K023595-022-770-G09-8409
TTTACAATTGAATATATCCTGCACAGAGTCTGATATTGGGCTTGAATTTGCCTATGGGAT
CCTCCCTATAGTGAAGCTAACCAATAATAATTTTAAAAAAAAAAACTGCCAACCAAAAAA
TAAATAAACCCGGGAGGATACCCCAAGGCAACCTCCCCATTGACAGGCTTTTCCCCAAAT
GGCTTCCCAAACCGTTCCCCAGGGACCCCAACAAAATCTTCTTCCCCCAAAAAAAAATGA
AGGTCTTGATTTGGAACCTTTCCATTGACACAAGCTAACCTAGGGAATCCCCCCTATATC
GAGTCGCATCCCCCC
GenBank Accession BX897638 [GenBank]
Graphic View Graphic view of gene At3g01310
Predicted Position of Insertion Chr3:100137 - go to primer design
BLAST e Value 3e-22
Hit Clone Code (BAC ID) T22N4
Hit Gene Code At3g01310 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Phosphoglycerate mutase-like family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37