SimpleSearch - Line and FST details
Line specific information
| Line ID | 777G05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N474573) |
| Segregation Analysis | 50:49:46 |
| Confirmed for Hit | At1g35580 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4159, 4240, 8356, 9918 |
Gene hit At1g35580
| Sequence (A. th genome BLAST matches underlined) | >39-K024865-022-777-G05-8409 CAGGCAAGGAAATACCAGACTTGGTCAATCGCAGGTTACTTAGTGGCGAAAATGTTGCTA TGGGATCCTCCCTATAGTGAGACTTATTGATCATCCCCCTAAGGGGAATTGGTAATACTC GGGGTTATGCGCTAATGGGAAAATATTGATCCACCCGCCTTTGGGGGGAGGCGGTTATTT GGGGCATGGGAGAAGGGGGGGGAGGGGGAAAATAGAAATATATTAACTTCTGTGAATGTG GGAAGTTATTGGAAGAATATGTAGAGGAAGCAATAGAAAAATAAGAAACGAAGGTAGATA GAATGGGGTTAGTATAGGAATTTACGGTATAGGGAAATTAGCCGTAAAAAGGATCAATAG TTGCGCGATGATTACATCAGAATAGTGAAATA |
| GenBank Accession | BX947170 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:13122612 - go to primer design |
| BLAST e Value | 7e-26 |
| Hit Clone Code (BAC ID) | F15O4 |
| Hit Gene Code | At1g35580 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | cytosolic invertase 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g09870
| Sequence (A. th genome BLAST matches underlined) | >39-K024925-022-777-G05-8409 CTTTCTTTTTCATGCATTACTTGACTTTAGTTTTTTTTTCTATGGCCATACTAATCATAT CGCAGTTCCATATGGGATCCTCCCTATAGTGAGTGGAATTACTCTGGGCTATACCCAATA TTGGATGTAAGGGAAATACCCCAATTTGAATATAATTTAATAATAAATGAATTTAAAATG TGGAGAAAGGGAATTTATAAAAAAAAAAATAATTTAAAAAAAAAAAGAAAATATAAAAAA AATAAAAAAATAGATAAAAAAAATTTGAAAATATAGATAATTAAAAATGATTAAAAAAAT AATAATATAATAAGAGAAAGAAAAAAACAGAAATAATGATAATTAAAGACTATTAGTTAT CTAAGAATACAAAAATAAAGATTATAAAATAAACAAA |
| GenBank Accession | FR815708 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:3072986 - go to primer design |
| BLAST e Value | 2e-04 |
| Hit Clone Code (BAC ID) | MYH9 |
| Hit Gene Code | At5g09870 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | cellulose synthase 5 |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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