SimpleSearch - Line and FST details


Line specific information

 
Line ID 778F10
Vector Used pAC161
Line Availability available as T3 set from NASC (N474662)
Segregation Analysis 50:47:46
Confirmed for Hit At4g35030
Parent of DUPLO pair none
Parent of pair(s) 93873, 93877, 93881, 93884, 93887

Gene hit At4g35030

 
Sequence (A. th genome BLAST matches underlined) 
>78-K024661-022-778-F10-8409
CGGACATGAGCCTTTACAATTGAATATTTCCCACCACATCACCTTGTATCGAATATCGAG
AAGATGTTGTCGGTCCCCACATCGACAGACCAAAATCTGACAGCTATTCTCATAATCATA
AGAAATACACTCGGTCTCTTATGAAAATTAACATATAAATCAAAGCTATGGGATCCTCCC
TATAGTGAGAGCTATTATT
GenBank Accession BX947273 [GenBank]
Graphic View Graphic view of gene At4g35030
Predicted Position of Insertion Chr4:16677273 - go to primer design
BLAST e Value 3e-74
Hit Clone Code (BAC ID) F11I11
Hit Gene Code At4g35030 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g25970

 
Sequence (A. th genome BLAST matches underlined) 
>78-K024866-022-778-F10-8409
GNAGCCATTTACAATTGAATATTTCCCTGCCATCACCATTGTATCGGATATCCACAAAAC
GTTGACAGCCTTCTCTTCGTCGGACTATGATCTGATTCCTATTCTCGTATGCCTAGGAAA
TGCCCTCGGTCTCTTATGACAAGTACCATATAAGTCACAGCTATGGTATGCTCCGAATTG
GGCGTGTAATTGTACATAGATGTGAAGTTGAATGGGGTAATGCATGACTCCCATAAGAGA
GCAAACCATTCTTTTGAGATATTCGATTATCGCATGTTGCAAAATACCGCCTCTCGGCTG
CCCGAATTGTCGTTCTTCCCCATTCTGCAACCTGTCCAATGGTGAAGATAATCCAATAAG
AATTAAATATAAGAACAAGTTACCAACTATGGAATCCTCC
GenBank Accession BX947274 [GenBank]
Graphic View Graphic view of gene At5g25970
Predicted Position of Insertion Chr5:9067630 - go to primer design
BLAST e Value 3e-37
Hit Clone Code (BAC ID) T1N24
Hit Gene Code At5g25970 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37