SimpleSearch - Line and FST details


Line specific information

 
Line ID 779H04
Vector Used pAC161
Line Availability available as T3 set from NASC (N474776)
Segregation Analysis 50:44:40
Confirmed for Hit At1g33540
Parent of DUPLO pair none
Parent of pair(s) 5944, 5969, 6044, 80177, 80194, 80207, 80220, 80234, 80247, 80260, 80261, 80262, 80263, 80264, 80265, 80266, 80267, 80268

Gene hit At1g33540

 
Sequence (A. th genome BLAST matches underlined) 
>32-K024662-022-779-H04-8409
TCTTATTTTAAAGGTTATTTGTTTTTGATAATCCTTTTTGTTCAATGAGAGATTAAAATT
TTTTTTTTATGAAAAAAAGTCTGACACGTGGGGAAATGTCTATGGGATCCTCCCTATAGT
GAGACCTATTAAATGTATATTTTTTAGTGATGTTAATTTTTATAATCTTGTTTGTAGTCG
CTTAAGAAAATCTGCCAAGGAAATTATGTAAAAGTGGATCCTACTAATACATGATGTTTG
AAATTGAAGGAGGACTACGGATTGGTAAAATTCAGTTTACTTTCTTATTGAGAATAATTA
TTATGATACTAATTGGGGACTAATTTTGACAATTTTTGGGTAATGGTGATGAATTTGCGC
ATCAAAAAGAACCCTATTTAAACTGAGAATTGTGGGGGAATTGTTGGAAAGGAGAACACC
CGAATACAGAAAAAAGGAGTGGAGGAAGATGAAATTGAGTGTTTCCAAG
GenBank Accession BX947448 [GenBank]
Graphic View Graphic view of gene At1g33540
Predicted Position of Insertion Chr1:12163498 - go to primer design
BLAST e Value 2e-51
Hit Clone Code (BAC ID) F10C21
Hit Gene Code At1g33540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation serine carboxypeptidase-like 18
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX947450 [GenBank] BX947448 [GenBank]


Last Updated on 10.06.2021 13:37