SimpleSearch - Line and FST details


Line specific information

 
Line ID 783A05
Vector Used pAC161
Line Availability available as T3 set from NASC (N475077)
Segregation Analysis 50:45:37
Confirmed for Hit At2g31470
Parent of DUPLO pair none
Parent of pair(s) 3895, 3906, 4069

Gene hit At2g41740

 
Sequence (A. th genome BLAST matches underlined) 
>33-K025723-022-783-A05-8409
GAAGCCATTTACAATTGAATATATATTGGAAATCACAAACACTCATGGCAATATGTTGCG
TACGTGATATCAGATCGAGGGTCAGCAGATATATCTAGAGTATGATCCTCCATTTCAGTT
AATTTCTCTATTTCTAACTTTTATATTGGCTATCTTATTTTCGTCCTGGTATTGCCTGGT
TGTGACTGGAGAACTTTGTATTTCCCTTCTGACTATTGAGGGTAACCAACTTATGTGTTG
CTCACCTGGTAGGCTATCCTCCCTAAAATGAGCAAGGTCGCCTGTGAAGTCTATAGCAAG
ATGTCCTTGCGTATCAGAGCTTTGGGCCTCCATACTCCGCCTACCCTATTTCACGGAGTT
GTATGGGATCCTCCCTATAGTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNN
GenBank Accession CR398559 [GenBank]
Graphic View Graphic view of gene At2g41740
Predicted Position of Insertion Chr2:17414584 - go to primer design
BLAST e Value 4e-55
Hit Clone Code (BAC ID) T11A7
Hit Gene Code At2g41740 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation villin 2
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At2g31470

 
Sequence (A. th genome BLAST matches underlined) 
>33-K025708-022-783-A05-8409
AGCCATTTACAATTGAATATATCCTGGCCATCATAAACACTATGGGTTATCCTGCATACG
GCTACCAGACCGATGGGATGCTCCCATATCTATGAGATGAGTTATCTTTCCATTTTCTAA
CCCCATTCTTCATATCGTTCCAAAAGAATTTGATTACCGCCCCGTGAAATCCCGGCGACA
GAATGTGTCCGTGGCTCGACCAACCATCCTTGGACGCGACGAAAACTTTGAACCAATCCC
AATTGATCTCGTTATCGAGATATTCTCAAGGTCGCCTGTGAAGTCTATAGCAAGATGTCG
TTGCGTATCAAAGCTTTGGGCCTCCATACTCCGCCTACCCTATTTCACGGAGTCGTATGG
GATCCTCCCTATAGTGAGANNNNNNNNNNNNNNNNNNNNNNTNNNNNNNCCNNNNGGGGG
GGGGCGGGAAAGAGAGTGNATGTATTTTGGCTAAATTGTAAGTCGCTGTATTAATGTAGA
ATAAAAAAAGATACGAGAAATTAGATATTAAATATAA
GenBank Accession CR398558 [GenBank]
Graphic View Graphic view of gene At2g31470
Predicted Position of Insertion Chr2:13408782 - go to primer design
BLAST e Value 4e-117
Hit Clone Code (BAC ID) T28P16
Hit Gene Code At2g31470 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box and associated interaction domains-containing protein
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37