SimpleSearch - Line and FST details
Line specific information
| Line ID | 784A10 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4971, 4992, 5001, 5013, 5042, 5092, 5101, 5105, 5148, 5198, 5200, 10242, 10244 |
Gene hit T16L24
| Sequence (A. th genome BLAST matches underlined) | >73-K024868-022-784-A10-8409 AGCCATTTACATGGACATGAATATTTCCAGCACTTAATCCCTTTTTTTTGTTCTCATATA TTCTATGTAATCTCTATTGAATGAGGATGAGCATTGAGCTCAAGTAAAGCTTAGCTATGG GATCCTCCCTATAGTGAGACGTATTACTCCCCCCACAAGAGGGAAATGGTAACTCCCGGC CTCATGGGACGTAGAGGAGCAAGGAGGGCCTGCTCTTTGCGGAAAACTTGGCATGAAGAG TTCGGAAGCACAAACAGCAAGAAACAATGGGATGAAAATGCGCCACCATAAACCAGTCAC CGAAGGGCGCCTGAACAGTAAGGAGGACTATAAATAAGCGACATAACGGGAATAAAGGAA GGAGAAAACGATAATAGCAGCAAAAATAAGACTTCGCACGAAGGCAATGCGCAAAAGAGC ATTATATGAAAATAGAAAGAAAAATAGTTTTCAGAGGACGCAAAGAAGAAATACCGGCCC CACCAAGGGACACAAAACGGGGCAAAGAAATAGAATAATAAATACTGGAAAAGAACAGAA GAGATA |
| GenBank Accession | BX947678 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:22043420 - go to primer design |
| BLAST e Value | 1e-30 |
| Hit Clone Code (BAC ID) | T16L24 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At1g05170
| Sequence (A. th genome BLAST matches underlined) | >73-K024928-022-784-A10-8409 AGCCATTTACAATGTGAATATATCCTGATAGGGATTAGTCCCTCTTTTTAGATAGGTTAA GGTCCTCTTCTTTTTTCAGCCGTTTGCTTTAGAGCATATATTATTGTAATTAGGTCCCCA ACACCAAAGATGTTGACGTTTTTTCAGTCCACTTAGTCAAAATATGTACATTGATTTTTG AGGCCTCTTAAAAGGTATCACAGCCAGCGGGAGAGGAGAAGAGCTTAAAACTTACCAGGA GGAGTTCCGCACCATAATCTTCTATCATCAATGTGTTCAACATCAATCCCGATAAACCAG GCTCCTATGGGATCCTCCCTATAGTGAGCCGAACCTTACTGGGTTTTAAGCTGATCCTTT AAACTCAGCCGCATTGAACTATACTGTAACACCTCCCTATACCAAATCTTGTACTACTAC TTTGCCCTTTGTGGCGCAGCATACACACTCCTCCACAACCGACTGAACAGCTGGAGCCGT ACAAAACTAATCCCTCTAACATATCTACACTAAACTGAC |
| GenBank Accession | BX947679 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr1:1491736 - go to primer design |
| BLAST e Value | 7e-91 |
| Hit Clone Code (BAC ID) | YUP8H12 |
| Hit Gene Code | At1g05170 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Galactosyltransferase family protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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