SimpleSearch - Line and FST details


Line specific information

 
Line ID 787D11
Vector Used pAC161
Line Availability available as T3 set from NASC (N475503)
Segregation Analysis 50:50:36
Confirmed for Hit At5g07420
Parent of DUPLO pair none
Parent of pair(s) 11090, 65304, 95600, 95601

Gene hit At5g07420

 
Sequence (A. th genome BLAST matches underlined) 
>84-K024931-022-787-D11-8409
AGGGTTAAATGGTGGCCCAGAGCCATTGTGGGATTTGGGATCTGTCTGCCGGAATTGGGG
TTATATCGACGGCGAGAACCACCGGAGAGGCAAAAAATACAAGTAATGCAACTAGGGCTA
TGGGACCCTCCCGATAGGGAGACAAAGGGGGAGGGGACCAAAAACCAGAGAAATGTAAAT
AAAACAAATACAAATTAGAGAAAAAAGCCGGAGGCCAATAAAAGAAAGAAAAAAAAAAGA
AAAGAAAAGGGGGAAGAGATAAAGAGAGAAGAGGACGCGAACAGATTAAAGGGAAGAAGA
TAGACAGAATCAAGGGAGAGGAGAGACAGGAAGAGAGAGAGACAGATATAAGTCAAAAGA
TGGCGAAATAGATGGTGAAAGAA
GenBank Accession BX948115 [GenBank]
Graphic View Graphic view of gene At5g07420
Predicted Position of Insertion Chr5:2349715 - go to primer design
BLAST e Value 2e-41
Hit Clone Code (BAC ID) T2I1
Hit Gene Code At5g07420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pectin lyase-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX948115 [GenBank]


Last Updated on 10.06.2021 13:37