SimpleSearch - Line and FST details
Line specific information
| Line ID | 790G01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N475817) |
| Segregation Analysis | 50:50:33 |
| Confirmed for Hit | At3g04770 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g04770
| Sequence (A. th genome BLAST matches underlined) | >07-K024935-022-790-G01-8409 AAAGAAGCTGATATCCTGATGATGTTATCTGCCCATGTCCACCGTGATACCCTTCACTGC AAATATGAAATGGATCGTTATGTCTTCTAAAGACTCGACCACCGTAAACTATCTCATCTT CATCCGAATTTCATTGTACTTGTAGTTCTATATAGAAGCAACGTTTCCACATTCATCTAC ACTTAGCTTACGAATTGATAGTTTCTCCCGTTTCCATAGTGTTGGGTATTCATCTGTAAT TCTCGGTTTCATAAAATTTTGTGATGTTTTCGACTATTTTTTTTTATCATAAGACTGACT ACCACCCATCACACCCATAAATCCTTCTCCACACTCCTCACTATATATACTCAAACACCT TCTACAATATTGCTAACTTCAATTCTCTTTGTTCCCCCCCCCTATACTCTCTCATCTCCT TAACCTCAATA |
| GenBank Accession | BX948519 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:1310834 - go to primer design |
| BLAST e Value | 2e-91 |
| Hit Clone Code (BAC ID) | F7O18 |
| Hit Gene Code | At3g04770 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | 40s ribosomal protein SA B |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T6L19
| Sequence (A. th genome BLAST matches underlined) | >07-K024936-022-790-G01-8409 NAGCCATTTACAATTGAATATATCCTGTCCGCCTTTACATTCAAAAAAGGCACAATGTTA GTAATTTGTGTAACAAAAGCGAACTTGATCTTAACGTTTCTAATGATCTCAAATATAGCA AACAAACACCAAACTGGCAACGGTGCCAAATTGATAGTAGGATTTTTACTCAATTAATCC TAAAACACTATCCTGTCGTTGTAGTATTTTAGGTTGTCAATCCAATCCAGTGTGATACAA ACAAATGAGATATGATTAGAAAGCTCTAAGTCAAGCCAAGTAGAGAGTTGGTTAGTTCTA ACATTCCTATGGGATCCTCCCTATAGTGAGACCTATGGCAATGCCGAAATCAAGGCATCG ATCCCGACATTACAAAACAAAACCCATAAGATCATCTCGATACAAACAAACATATGAACG AGCCCAATGGGGGAGGGTCCCATAACATTATTATTATAAGCACACACTAAAAACAAAAAT CTTAAACAACAAATA |
| GenBank Accession | BX948520 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:15137333 - go to primer design |
| BLAST e Value | 5e-150 |
| Hit Clone Code (BAC ID) | T6L19 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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