SimpleSearch - Line and FST details


Line specific information

 
Line ID 793G07
Vector Used pAC161
Line Availability available as T3 set from NASC (N476111)
Segregation Analysis 50:49:47
Confirmed for Hit At1g10270 At1g68980
Parent of DUPLO pair none
Parent of pair(s) 12309

Gene hit At1g10270

 
Sequence (A. th genome BLAST matches underlined) 
>55-K025016-022-793-G07-8409
ATATGGATGGTTGTTGGAAAGTTTCCATCCTATGGGATCCTCCCTATAGTGAGACCTATT
ACTCCCCCCCTTACTGGGACTTGGTAACTCCCTGGGTTACCCACTCTCGGGAGTCC
GenBank Accession BX948862 [GenBank]
Graphic View Graphic view of gene At1g10270
Predicted Position of Insertion Chr1:3363193 - go to primer design
BLAST e Value 4e-09
Hit Clone Code (BAC ID) F14N23
Hit Gene Code At1g10270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glutamine-rich protein 23
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences

Gene hit At1g68980

 
Sequence (A. th genome BLAST matches underlined) 
>55-K024938-022-793-G07-8409
CGGACAGAAGCCATTTACAATTGAAGAGTGGAGGATTGTAGTTAGAGTCTTTCTCAACAT
TCAAGAAACAAGGGATCGTCTCCGTCTCCGTCTCTTTGTTATTGCGAAGTCCTTCTATAT
GTCTTAAGATAATCTGAAGTCTGTCTGTCTCGTGCAAGAAAATTGATTGTCTTAAGATAC
TCTGCTACAGACAGAGGGTTCGCTGCTGAGGTGGTTACACTTTGAAAGTTTTTTAGTTTC
ATGTTTATTACGATCAACACCTTCAAAGCTCACTTACAAACTGGAAAGAGATGATCTTTA
AACAATCTTAACCATGAAGTATACAGAACAATGTGATGATTTGCTGGCCAATGAAAAAAC
CTTAGATAAGTGAAAATCATCTTCATGTTGGGACATTAAAAGAAAGAAGAAATCAAAGGA
AATTTACAACTTGTACTATATTGACAAATGAATTTGATGAGTATCTCTCTTACATTCCTA
TACTATGGCATACATAAGAAAATATAGTACAGTATTAGTCTA
GenBank Accession BX948861 [GenBank]
Graphic View Graphic view of gene At1g68980
Predicted Position of Insertion Chr1:25933043 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T6L1
Hit Gene Code At1g68980 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Tetratricopeptide repeat (TPR)-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37