SimpleSearch - Line and FST details


Line specific information

 
Line ID 794G03
Vector Used pAC161
Line Availability available as T3 set from NASC (N476203)
Segregation Analysis 36:36:31
Confirmed for Hit At4g29740
Parent of DUPLO pair none
Parent of pair(s) 4134, 4195, 4214

Gene hit F16A14

 
Sequence (A. th genome BLAST matches underlined) 
>23-K024939-022-794-G03-8409
TGGGATCCTCCCTATAGTGAGAGCGTATGACTCGCCCGTAAAAAGTAGATTCCATGAAAA
TCTAAAGCCAATCGAGATCTGATTTTAGTTCGATTTTTTACTTTGTAATACCGACCAATG
ATAATTATAAACAAACAAATTTAGAGAAAATTAAACTCCGAATTAATCAGAATGGGTTGT
GCATTTATACAAATCTTGACGAAATTTAAAATTCAAATGTAAATGATTCCATCTACATAA
GAAAAGAAAAAACTACATACAAATCATCAATCTTGGACTAATTATGTGTGTTTGATCAAA
TAATATCTCCAGTGACGGATTAAAGAAACAAAAAAATCATTTAACCAATCCATAACGGTA
CAATGGTCAATAACTTAAATAATTTTATCAAAAAAAATTACAACAAGATTCAAATTATCT
TGCTATGGGATCCTCCCTATAATGAGGCAAAACCAGGAAAGAAAACAACAGCGAATCAAC
AGAAGACGGAATATAATGACAACCATGAACAAAGAAAAAGAGAAAAACAGA
GenBank Accession BX948965 [GenBank]
Graphic View Graphic view of sequence BX948965 of line 794G03
Predicted Position of Insertion Chr1:4769665 - go to primer design
BLAST e Value 7e-165
Hit Clone Code (BAC ID) F16A14
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g29740

 
Sequence (A. th genome BLAST matches underlined) 
>23-K025018-022-794-G03-8409
GAACTGCCCATACTCGTAGAGATCTGACTCTATCTTCTTCGTTTCGGACACGGCTCCAGA
AATCGAAATACTGAAGATCTTGTACGAACATACACCCTGGAGCGAAACCTATGGGATCCT
CCCTATAGTGAGCCCCTATACTCTCCCCTATACCACGCGCTTCCTACGCTCTATCTAATC
TCTCTTCCGTAGGATCTCTCTAATTTTCTACTTTTCTCTCGCTACTCTCCGCCTGGTTAT
ACAATTTTATTCCTCCACGGTGAATCTTACACGTCACCTCAAAGTAGTGGACAGCTTTAA
TCAGCTATTATAGTTTTTAAAATAATATATTAATTACTGTTAATCTCCTTAATTTTATAT
ACTATTTATATCTA
GenBank Accession BX948966 [GenBank]
Graphic View Graphic view of gene At4g29740
Predicted Position of Insertion Chr4:14568617 - go to primer design
BLAST e Value 5e-30
Hit Clone Code (BAC ID) T16L4
Hit Gene Code At4g29740 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cytokinin oxidase 4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37