SimpleSearch - Line and FST details


Line specific information

 
Line ID 795E06
Vector Used pAC161
Line Availability available as T3 set from NASC (N476278)
Segregation Analysis 50:50:45
Confirmed for Hit At3g13170
Parent of DUPLO pair none
Parent of pair(s) 3961, 3973, 3983, 4008, 79757

Gene hit At1g02000

 
Sequence (A. th genome BLAST matches underlined) 
>45-K024969-022-795-E06-8409
GAAGCCATTTACAATTGAATAGATACTGCCCTACATCGAATACATAGGAGAAAGGATGTT
CCGTTGAATGACTCCTTCCAATATCGAAATAGCTTTCCCTTTGAGGATGACTCTGGAGAT
AAGGAAGTAACCCGAGTCAGGTCTGCACGACAGTCCGCCACGCCGGGAAAAACCTCAAGC
CGATGAGAGAGAGCCCGTATATGTGGTTGTAAGTGAGGGCAGACTCATCTCCTACTTTCT
TGGTCGCTGCGTAAAGACTCGCAGGCTGATCTGTTCTGTCTTTCTCAAAGAAGGGGACTT
TGGTGCTAAAACCATATACAGAGCTATGGGATCCACCCTATAGGAAGTCATATGATACGC
GGGAGGATCCGACCCGAAGGAAAAGAAGAAAGTTATAGATACAAACAATAAT
GenBank Accession BX949048 [GenBank]
Graphic View Graphic view of gene At1g02000
Predicted Position of Insertion Chr1:346993 - go to primer design
BLAST e Value 3e-56
Hit Clone Code (BAC ID) F22M8
Hit Gene Code At1g02000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation UDP-D-glucuronate 4-epimerase 2
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At3g13170

 
Sequence (A. th genome BLAST matches underlined) 
>45-K025019-022-795-E06-8409
AGCCATTTACATTGAAATGGATATGCCTGATATCATTTTAAGTGATGCTTTATGCTCTTT
AGAGAAGTCAAATCCTTATCTCAGCTGATATCAGGAAGTATAAGATTCACTATCTATGGT
GGCATCAGGAACTATAATTGGATGTCATTTTCCTGCTTGCAGATATTGTTAGCTTAGCTG
AGTACATACTGGTTGTGGAAAAAGAAACAGGTAAGAAAGACCTCTTATTTATGTAGTAAC
TATGGGATCCTCCCTATAGTGAGACGACATAAATCACTCACCAAACATGGTTCATATTAT
TCCGAGTCTATACTATATAAATATCAATTTAACAATAATACTTAAACTACTCATCGCCAG
ATGATCTAGACACCATACATTATGGGGTTTATCCTATGTTTAATTGTTACTACATTCACA
ACACTCAGGACAGGGGCAGTAATGCAACCATAGTA
GenBank Accession BX949049 [GenBank]
Graphic View Graphic view of gene At3g13170
Predicted Position of Insertion Chr3:4232855 - go to primer design
BLAST e Value 6e-116
Hit Clone Code (BAC ID) MJG19
Hit Gene Code At3g13170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Spo11/DNA topoisomerase VI, subunit A protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37