SimpleSearch - Line and FST details


Line specific information

 
Line ID 805C01
Vector Used pAC106
Line Availability available as T3 set from NASC (N477209)
Segregation Analysis 50:6:5
Confirmed for Hit At1g33540 At1g44110
Parent of DUPLO pair none
Parent of pair(s) 61756, 93891

Gene hit At1g33540

 
Sequence (A. th genome BLAST matches underlined) 
>03-K023939w-022-805-C01-8409
TCCGGACATGACCATTTACATTGAATATAGCGATAACCGGTGGTGGGATCAAAGATATCA
AGCTTGCGAATTGAGTTACATTATTTGTAAATGAATTATAAAATACATGATTATTGAACT
GGTAATTTGAAAGATACATTCCAACCTATGGGATCCTCCCTATAGTGAGTCGTATTACTC
ACCCCCTTAGACGGAATTGGTAACACAGTGGCTCCGACTCTCTGCTTAGTCGGAGAAATC
TGCCCCTCTTCTGCCCCCGTTGACAAGGAAACCAGCGCCGTCCAGTATGCTGACCCAACG
ATTATCTCTTCTTCCTTCTAAAA
GenBank Accession BX949987 [GenBank]
Graphic View Graphic view of gene At1g33540
Predicted Position of Insertion Chr1:12162152 - go to primer design
BLAST e Value 3e-62
Hit Clone Code (BAC ID) F10C21
Hit Gene Code At1g33540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation serine carboxypeptidase-like 18
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g44110

 
Sequence (A. th genome BLAST matches underlined) 
>03-K023940w-022-805-C01-8409
TCTCGCTTTGTCTTTCGCTTTCGCCAATTAAGACTCTGATTTCCTTTTTCAGAGATTCTC
AGAGAGGATTCATTTTACCCTAATAAAAAAAATGTCGAACATTCTTCAGAATCGGCGATC
TTCGTTTTCCTCTTCGACGAAATCTTCATTAGCGAAGCGTCAAGCACCATCTTCATCGGA
GAATTCTGTTAAACTTATGCCGGCGATGACGAAGAAACGAGCACCGTTAAGTAACATTAC
CAATCAAAAAATCGCCTCACGATTACAAAATTCTGATTCGGTGAGGTTCTTCAATTTCGC
TATGAATTTTTCAAAATCTTTCGTTTCTGTGATCTATTTAGTTTGATTTGAAAATTCACT
TACTCTAGTTCACTAAAAATCCATTGTTTCTTCGCTTCATTGTATGGTGGGGGATTGGCT
TTTGCGAAGGGGAAAAGGAATCTCCGCGGAGAACCTGTGGAAGAGGAAGAAGAGT
GenBank Accession BX949988 [GenBank]
Graphic View Graphic view of gene At1g44110
Predicted Position of Insertion Chr1:16777286 - go to primer design
BLAST e Value 3e-179
Hit Clone Code (BAC ID) T7O23
Hit Gene Code At1g44110 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cyclin A1;1
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37