SimpleSearch - Line and FST details


Line specific information

 
Line ID 808H09
Vector Used pAC106
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 259, 5256, 8631, 9509, 10307, 65114, 95516, 95518, 97841, 97857

Gene hit At5g20490

 
Sequence (A. th genome BLAST matches underlined) 
>72-K025561-022-808-H09-8409
ACATTGTATATCACAAATATAGGGTCGGCTCTATGTCCATTGAGAAAAGTTACATCTATA
GTATGTTTCCAACTCTTTCCTTTCACCATGGAGGGAAAAGAGCACTTTGCAGACATCATC
TACTTCTGAATTCATGAAATCGTTTACAGATATTACTTAAGCATAATGACTTCTGTCTCC
CTTTTACTCTACCTGTTCATCTTCTGGCTTACCAACCCCTTGATATTAACAACGCCAGTA
ACTGTCTTATAATTCCAATCTTGCCCGATGGAATTGATAATTTTCTCCTGAAGCCTGAAA
TTGAATTATACTGGTTTAAAAAAGTTCCAAAACTTCTAATGTCATATGAACTGACCTATT
TCCATAAGGTATTAGCCCACATTTCATAGTAAAACTTGTCCTCTATA
GenBank Accession FR816093 [GenBank]
Graphic View Graphic view of gene At5g20490
Predicted Position of Insertion Chr5:6933583 - go to primer design
BLAST e Value 7e-20
Hit Clone Code (BAC ID) F7C8
Hit Gene Code At5g20490 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation myosin family protein with Dil
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At5g39020

 
Sequence (A. th genome BLAST matches underlined) 
>72-K025204-022-808-H09-8409
TTCCTTCTATCATTCAAGACCTTTACTGCAACCGTACGTCCATTAGAAAGGTTTCCTCTA
TATACAGTTCCAAACCCATCCTTTCCCAACAGTGTGGGAAAACGACTTTGTAATCTTCTT
CAATTCTGCATAAATGTACTGTTTCAGTAGTAACTTGAACATAATGACACTATTCTCCTT
TTTATTCTTCTTCCTCTTCATCTGACGGATCAACAACATGATGATAACAATGAAAGTCGC
TATGGGATCCTCCCTATAGTGAGACAAAGCAATAACAGAATCCTCCGGAAATTACGGGTA
AACAGAAGAATTAAGAGACAAGATCACAGAGATTTAAGCAGATCTGTAGGAGCCTAAATC
TAAAACAAAAGAACCCATAAAGTCAAAGAAGAACAACAAAACCCAGAAAAAGATAAAGTC
GTCTTCTTCTTTTTTTTTTCCCTGGTCCCCGGCTTTTTG
GenBank Accession CR360108 [GenBank]
Graphic View Graphic view of gene At5g39020
Predicted Position of Insertion Chr5:15618496 - go to primer design
BLAST e Value 1e-122
Hit Clone Code (BAC ID) K15E6
Hit Gene Code At5g39020 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Malectin/receptor-like protein kinase family protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37