SimpleSearch - Line and FST details


Line specific information

 
Line ID 809E10
Vector Used pAC106
Line Availability line died - no seeds available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 78542
Note

Gene hit MBK21

 
Sequence (A. th genome BLAST matches underlined) 
>77-K025223-022-809-E10-8409
CCATTTTTGACCGTTTCGGACCCATAAGACTGCCATTGACTCGTCGACCGTACTACTTAG
AACTTGATAATACAACTTTACCAGACTCTCGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession FR816104 [GenBank]
Graphic View Graphic view of sequence FR816104 of line 809E10
Predicted Position of Insertion Chr3:4046365 - go to primer design
BLAST e Value 7e-20
Hit Clone Code (BAC ID) MBK21
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g44670

 
Sequence (A. th genome BLAST matches underlined) 
>77-K025555-022-809-E10-8409
GGACATAAGCCATTTTACAATTGAATATATCCTGTACCTATACTAATCATACATTGAATG
TGGGATGTCGAAATAATCTGATGAGAGGCGCCTCGCGACAGCGGTATAATGAGATGATGC
ATAACTATAGTGTCGCTATAGAAGGTTCTCTCATCTGTGGTTATGTGATATTTGAGAGCT
ATTACGAGAGGATGATGCTTCTAATCCATTATTATGATAGAAACAACGTCGTCCGCTTTG
GTTGATGATTGATATCTTGGAAGGCTCGCTACATAGATGATGCATTTTATCCCTCATCTG
TTATCCTTTTACTATGGAATCGCTATATAGATCGCGATATTTCCGTCGAGGCTAGTTTTT
AACCTTGGTAGTGTTCTTTCCCACTCTGGCTTGGACTTCCCCCGCAAAGCAGAGCCTATG
GGATCCTCCCTATAGTGAGGATCACAATCTA
GenBank Accession FR816105 [GenBank]
Graphic View Graphic view of gene At3g44670
Predicted Position of Insertion Chr3:16219273 - go to primer design
BLAST e Value 3e-40
Hit Clone Code (BAC ID) T18B22
Hit Gene Code At3g44670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Disease resistance protein (TIR-NBS-LRR class) family
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 810E10


Last Updated on 10.06.2021 13:37