SimpleSearch - Line and FST details


Line specific information

 
Line ID 812H09
Vector Used pAC106
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 467, 5888, 6014, 10450, 10456, 10460, 10465, 10496, 10520, 11378, 78516, 78573, 78842, 78847, 78848, 78850

Gene hit At1g64070

 
Sequence (A. th genome BLAST matches underlined) 
>72-K025225-022-812-H09-8409
ATGAAGCCATTTACAATTGAATAATACTGGTATATTCATTCAATTAGATACTTAGGCCAC
GTGCACACCCCATGTCCGCCGGTATATCCATTCAAGTACATCCGGCTCGTATTGGCTTGA
AAACTATTAAGAATCGGTCACTGTTCCTACGTCAAAAACCTTTAATGATTATAATCCCTT
CATTAGTTCCAGAAGTATCTAAAAATATGCCCGCACCTACTCCTAAATACATCAAAAGAA
TCTATCTATCTATACCTAGCTATACTTTTACAGGATGATTGTGTTCGCCGTGCTCTGGGA
AAAGCGACACGTATCGATTTAAAAATCGAAACTAAATTTTACATAATTACAAGCCACTTA
CTATATCTTTTTCAAGGACATGACAGATTTCTTGAGCATCAATTAAAATCCCACGTTATC
C
GenBank Accession FR816136 [GenBank]
Graphic View Graphic view of gene At1g64070
Predicted Position of Insertion Chr1:23782089 - go to primer design
BLAST e Value 2e-20
Hit Clone Code (BAC ID) F22C12
Hit Gene Code At1g64070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Disease resistance protein (TIR-NBS-LRR class) family
Insertion Classification CDSi
Confirmation Status unknown

Gene hit F2P16

 
Sequence (A. th genome BLAST matches underlined) 
>72-K025563-022-812-H09-8409
AGCAATTCAATTCAATTAGATCACATTCGTCCACCTGAAGACCCTATGACTGCCGCAACT
TACAATTAAGTACTTACGGGTCGTAATTGCTACAAAATTATTAATAAACGGTCCCATTTC
GGATGCCATAAACCATTTATTATTAAAATCCCTTGAATTGGACCAGTAGAACGTATACAT
ACGCACACACATAATCATAAATATATCAAAAGAAACTATCTATCTAAACAAAGCTATACT
TTTACAGGTTGATGTGTTCACTGTGTTTGGCAAAAAGGGTCATGTTCATTTTTAAAAGTT
GATACTTAAATTTCTGTATTTTACATGTCCCTAACGATACATTCTTGATTATTTGACTTA
TTTCAGAGATCATAATATAA
GenBank Accession CR398871 [GenBank]
Graphic View Graphic view of sequence CR398871 of line 812H09
Predicted Position of Insertion Chr5:9495911 - go to primer design
BLAST e Value 3e-108
Hit Clone Code (BAC ID) F2P16
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37