SimpleSearch - Line and FST details


Line specific information

 
Line ID 816B02
Vector Used pAC106
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 80003, 80015, 80039, 80040, 80048, 80067, 80074, 80082, 80088, 80092, 80098, 80103, 80104

Gene hit F20P5

 
Sequence (A. th genome BLAST matches underlined) 
>10-K025638-022-816-B02-8409
GNAGCCATTTACAATTGAATATATCCTGCTATCATTTGAGTGAATTAACCATGCGTTGAA
TATTTACACTCATGATCCTTGGGTTCAGCATTTCTCACCAAGTAAATACCATCACCTCTG
GAAACCCATTTACGTATGGGATCCTCCCTATAGTGAG
GenBank Accession CR399230 [GenBank]
Graphic View Graphic view of sequence CR399230 of line 816B02
Predicted Position of Insertion Chr1:26416496 - go to primer design
BLAST e Value 7e-26
Hit Clone Code (BAC ID) F20P5
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g61310

 
Sequence (A. th genome BLAST matches underlined) 
>10-K025606-022-816-B02-8409
NNNNGGTGTAATTCGGACATGAGCCATTTACAATTGAATATATCCTGGTATGCCTTGAGC
GAATTAACCTTGCGTTGTAAATTAAATCTCGTGAACCTATGGCGTCTATTGTTTCTCACC
TGGGAAATACCATCACCGTCTGGGATCCCGTTTCTGTATGGCACCCTCTTTTTAGGGAGA
AGAGATTTGTTTTGATGCTAGATGATATATGGGACAAAGTGGATTTAGAGGCCATTGGTA
TTCCCTATCCGAGTGAAGTAAATAAATGCAAAGTAGCATTCACGACACGTTCTCGGGAAG
TTTGTGGGGAGATGGGGGATCATAAGCCGATGCAAGTCAACTGTTTGGAACCAGAGGATG
CATGGGAGTTGTTCAAAAACAAGGTCGGAGACAACACATTAAGTAGTGATCCTGTTATTG
TGGGGTTGGCAAGAGAGGTGGCTCAAAAATGTCGTGGTCTGCCATTGGCGCTCAACGTCA
TTGGTGAGACAATGGCATCTAAAACTATGGTATGGGATCCTCCCTATAGTGAGANNNNNN
NN
GenBank Accession CR399229 [GenBank]
Graphic View Graphic view of gene At1g61310
Predicted Position of Insertion Chr1:22615299 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T1F9
Hit Gene Code At1g61310 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation LRR and NB-ARC domains-containing disease resistance protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37