SimpleSearch - Line and FST details


Line specific information

 
Line ID 816E03
Vector Used pAC106
Line Availability available as T3 set from NASC (N478291)
Segregation Analysis 50:5:3
Confirmed for Hit At3g54010
Parent of DUPLO pair none
Parent of pair(s) 4604, 9978, 9979, 72813, 72814, 72815, 72817

Gene hit At3g54010

 
Sequence (A. th genome BLAST matches underlined) 
>21-K025638-022-816-E03-8409
TCTGATGACATATTCTTCTGTATGTCCCATCCCTGGCATAACCGACCTTGTAATCCAAAT
ATTCTTCCGGGGGTTTGTGAAGATAGCGCTTTAGAGAGAAGGAGTTTCCGGACTAAAATG
CGGATGGTAAGCATTTGGAATAGATCGTATGGGATCCTCCCTATAGTGAGCTCACAAACT
GGAAAATCAAAATCCCTATCAGAACAACACCAAGCTGGATTCCGATTTGGAGCATCACGT
TCTTCAGAAACGGCCAGGCTTTCTCCGACCATTTCCTCTTCCTTTCCGTGCTCACTGTCG
TAGCTCCTTCTTCTTCCAGTGTTTCATCATCATCATTATCCTTTGTCTCATCTACTTCTT
CTATAGTTTTAGACTCCTCTCTTATTTCTGAACCAACTTCGGTTATCTCCCCCGGTCTCT
TGTCGAATAATCCTTTGAACTGTTTTCTAGCCTTGCTCTCCGCTTCCTGTGAGCTCAAAA
GAAAACAACTCAAAGATCTTATATTAAGTAACAAAATTGGCAAAACAAGC
GenBank Accession CR399280 [GenBank]
Graphic View Graphic view of gene At3g54010
Predicted Position of Insertion Chr3:20005188 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F5K20
Hit Gene Code At3g54010 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FKBP-type peptidyl-prolyl cis-trans isomerase family protein
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences

Gene hit At5g46470

 
Sequence (A. th genome BLAST matches underlined) 
>21-K025606-022-816-E03-8409
ACATGTCACCACTGAGTTTGGGATCCTCCTAATCTTGAGGGGGTTTGTGAAGATAGCGCT
TTAGAGAGAAGGAGTTTCCGGACTAAAATGCGGATGGTAAGCATTTGGAATAGATTGTAT
GGGATCCTCCCTATAGTGAG
GenBank Accession CR399279 [GenBank]
Graphic View Graphic view of gene At5g46470
Predicted Position of Insertion Chr5:18846560 - go to primer design
BLAST e Value 8e-38
Hit Clone Code (BAC ID) K11I1
Hit Gene Code At5g46470 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation disease resistance protein (TIR-NBS-LRR class) family
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37