SimpleSearch - Line and FST details
Line specific information
| Line ID | 817A07 |
| Vector Used | pAC106 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 6417, 6430, 6431, 6441, 6442, 10635, 10639, 10644, 36207, 81293, 81294, 81296, 81297, 81301, 81302, 81303, 81304, 81305, 81306, 81309, 81311, 81316, 81375, 81376, 81380, 81381, 81383, 81391, 81404, 81412, 81445, 81452, 81457, 81460 |
Gene hit At2g42300
| Sequence (A. th genome BLAST matches underlined) | >49-K025722-022-817-A07-8409 GAGTTAATTATAAAATCTGATCCCCGGGTATGGGATCCTCCCTATAGTGAGAAACGGATT GATCCACTTGGAACTTTTATACATCATCCGTCGGATGGCGTTGCGAGAATAACAGTCGAT CCTTGAGATCAGCCGACGCACCGGGTCCTGCTCTCTCACGATCGCAAAGTATTTGAACGC ATGTATGGGATCCTCCCTATATTGAGACTTTATTAAANCTTCCTTCTTTATTATATTTTT TCTGCTTAAAAAATAATTGGACCTCATCATTATTAACCCATTTTGTAAAACATATCANCT TCTCTTATATATGATTGATCCAACATCCTGAATTTTTTTTTCTATTCAACAAGCTCACTC TATTTTTCTGTAACTCATCCGAGAAGATCAAGTTTTTTATTGAATGGTGTCCTGTTTTTA AATGGT |
| GenBank Accession | FR816201 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:17624780 - go to primer design |
| BLAST e Value | 2e-26 |
| Hit Clone Code (BAC ID) | MHK10 |
| Hit Gene Code | At2g42300 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
Gene hit At3g14540
| Sequence (A. th genome BLAST matches underlined) | >49-K025709-022-817-A07-8409 AAGCCATTTACATTGAATATATCCTGGATCTATACTAGCGCTTACATTAGAGGATAGAGC TGTTGAAGAGCCTTCTCGGTGAGTCTGGAACCTTATGGAATCCTCCATATACTGAGACCC CAAGATCCCGCTGGCTATAAATATGGGATCCTCCCTATAGTGAGNAGATCTCNTTGTANC CTTCTTCTTGTTCGTAATAAGATATATATTCTCGGGCTACCANTATGGGATCCTCCCTAT AGGGAGACCTCCCTATAGGGAGCTGCTTAGGGAAACCCCAATGGAAACGCCCTAAAAAGG GTCTCTATCGTTTACACCCCACTTACCCCCCCCACCATTACAACTCCTTTTCCTTATATC TCCAAACTCACGCCCATAGCACTTCTATCCTTTTCATATAAATATCATCTCACAACTACT ACTTTGGCAGGGCGCTAAACTTCCTCTATTTTTCACCCCCCCTACGCTAGTATATCTTCC CATTCTAAATCATAGATCTACTTTTTCCCA |
| GenBank Accession | CR399342 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:4882790 - go to primer design |
| BLAST e Value | 4e-12 |
| Hit Clone Code (BAC ID) | MIE1 |
| Hit Gene Code | At3g14540 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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