SimpleSearch - Line and FST details
Line specific information
Line ID | 819C03 |
Vector Used | pAC106 |
Line Availability | available as T3 set from NASC (N478555) |
Segregation Analysis | 50:22:17 |
Confirmed for Hit | At1g64380 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At1g64380
Sequence (A. th genome BLAST matches underlined) | >19-K025639-022-819-C03-8409 AGGGAGGAAACGATGATCTGATCCCCGAGTATGGTATCCTCGCTATATGGAGCATGTGCA CCTTCCCCCCAACACGGTGAGCGACGGGGCAGCGGAGTGATCCTCATGGGACTTTTAAAC ATCTTCCGTCGGATGGCGTTGCGATGAGAAGCATTCCATCCGTGAGATCACCCGACGCAC CGGGCGGGCGCGCAACACGATCGCAAAGTATTTGAACGCATGTAAGGGATCCTCCCTATA GTGAGCTCGGAAATCTCAGCATCTCTGTCTCAGATCATATTAGCAGGAGGACCAAACACA CTCGACTCAATCTTCTCACTTCTCACTCCCTCCTCCGTAGAATCCGCCACAACATCATTC AACACTCTCAATCCTCCGCCACCGCCACAGCTCGGGTCCTCCGTCTATCTCTGCCTTCGA TATATCATCGATAAGTTCTACCTTCAGAATATAGCAATCTCTCTTCTTCATCCTCCTC |
GenBank Accession | CR399563 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:23892226 - go to primer design |
BLAST e Value | 2e-88 |
Hit Clone Code (BAC ID) | F15H21 |
Hit Gene Code | At1g64380 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Integrase-type DNA-binding superfamily protein |
Insertion Classification | Promoter |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |