SimpleSearch - Line and FST details


Line specific information

 
Line ID 824D11
Vector Used pAC106
Line Availability available as T3 set from NASC (N479055)
Segregation Analysis 50:10:10
Confirmed for Hit At1g03960
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At1g03960

 
Sequence (A. th genome BLAST matches underlined) 
>84-K025528-022-824-D11-8409
TGAATATTTTGATGAAGACNTCTGCACTAATAAGTTTGGCCGCAGCACATCTGGAAATGA
TCTGTAGAGAGTATCTGTCGTAGTTGCCTCAACACCTAAATTTCCTATAGAACTGTCTAT
GCGCTTTTAAAGCTTTGAAAGGCAATGGGAAGTGCTGGTTGGTGATCCGAAGACAAACAA
CACTCGATTTGTTGTTCATGATTGAGTACAACAACTGAAACCGTCACCAAATCTTAAAGA
CCTAATTAATGCTACCTTGTTAAAATAGAGATAGTCCCAGACCCACATGGATGTTGGACA
ATTATATTTGTTCTTAATGACTCAAACCAAAGTACGATAAAGTGCCTTTAGCAGATAAAA
TATGTCGTATTCTGTGTTATTTTTTTCCCTCTTGAGTGCCATAAAAACTCCAGTGGTAAG
CCAAACTTACCTGGTTAATGAGAAATGGGACACGTGTTTCAAATGCCATGAACTTATTAA
GGTTGAAGAGTATATTGAAAACGTTTGC
GenBank Accession CR360910 [GenBank]
Graphic View Graphic view of gene At1g03960
Predicted Position of Insertion Chr1:1017592 - go to primer design
BLAST e Value 2e-54
Hit Clone Code (BAC ID) F21M11
Hit Gene Code At1g03960 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Calcium-binding EF hand family protein
Insertion Classification TS2TE (3')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR360910 [GenBank]


Last Updated on 10.06.2021 13:37