SimpleSearch - Line and FST details


Line specific information

 
Line ID 837B11
Vector Used pAC106
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 95386, 95387

Gene hit F15E12

 
Sequence (A. th genome BLAST matches underlined) 
>82-K025703-022-837-B11-8409
GNAGCCATTTACATTGAATATATCCTGACAGCTCTGCCTGGTTGTAGCCGAGGGACGGTC
TGCGTCCCCGGTGATGCCCGGGTATGGTAATCCGCGCTATAGTGAGCCCCATTGATACGC
CGATTATGTGCACCTTCTCCCCTGCCAGTTGAGCCACGTGCCCTTTCATAGATCCACCTG
GAGACTTTTATCCTCCTCCCTCTTAGGATGCTCCCTCTAAATCTTCCCAATCGGAAGATC
ATCCGACACACCGGGCCGGCCCGCGACACCATCCCACACTATTTGAACGCACGTATGACA
TCCTCCCTATATTTAGTCGCTCGTATGGGATCCTCCTCTAAGTGGTGCTCAGTTTCCACC
CCCTCATGGGCCTATCTCGCTGGTGTTCTCGTTGCAGTCCATGTGGTTTATGTGAATCAT
ATGTCATGCGCGGCGGCAATAAGGAAGGTCGATTACTGTGCGACCCTCCTTTGTTATGCT
ATCGATTCTCTTATTAGATCGCAAATGTTTGTTCTACGCCTTCACTCTCTACTCACA
GenBank Accession FR816487 [GenBank]
Graphic View Graphic view of sequence FR816487 of line 837B11
Predicted Position of Insertion Chr1:24619157 - go to primer design
BLAST e Value 9e-04
Hit Clone Code (BAC ID) F15E12
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g14820

 
Sequence (A. th genome BLAST matches underlined) 
>82-K025717-022-837-B11-8409
NNNTTTTGCGGATATCCGGAATGAACCATTTACAATTGAATATATCCTGATGACTGTGAA
TCCTTGACTCTCAGCAGCCCAAGAGAAGAACCTATGTGCAGGCTTTCCTAGCATGTCGAA
AACGTTCTAAAACCTCAACGATGAGATCATGTGATAAATCTAGTTTCATTTCATCAAGAA
CAGCTTCCATATTTCTATCTAACGCAAACAATTCATCAATCACTTTGCAGACTCTCTCTA
CTTCTTCCGGATTAGTATGGGATCCTCCCTATAGTGAGACNTATTANTCGTGCCTATTAA
TTTTATAAAGAGAAATTGAGAATTACTTGTTACTGAACGTTATAAAAGCATGAGGGGGAA
ATGTTTCAAGTGACATTTCTTCAGATGGTTCCGATACTCGGACATGAATATGGGATCCTC
CC
GenBank Accession CR400594 [GenBank]
Graphic View Graphic view of gene At5g14820
Predicted Position of Insertion Chr5:4793300 - go to primer design
BLAST e Value 4e-92
Hit Clone Code (BAC ID) T9L3
Hit Gene Code At5g14820 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pentatricopeptide repeat (PPR) superfamily protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37