SimpleSearch - Line and FST details


Line specific information

 
Line ID 843C09
Vector Used pAC106
Line Availability available as T3 set from NASC (N480865)
Segregation Analysis 60:16:16
Confirmed for Hit At4g00335
Parent of DUPLO pair none
Parent of pair(s) 4470, 4676, 7326, 7341, 9991

Gene hit At4g00335

 
Sequence (A. th genome BLAST matches underlined) 
>67-K025743-022-843-C09-8409
AAACCGAGGGCGGGAAACGCAAAGCCGATGCCCGGGTAGAGTATCGTGCCAATAGTGAGC
CGGTGTTCCCACAAGATGTGACTTCCCCCAAGAACTACAGCCACCTCCCATTTTCCCCAG
CCATAGTAATAATTAAGCCAGAGTAGCCGAACACAGTCCCTGAAGCCTTTTACAGATGCC
CTGCCCCTGCCGGAAAAGAGTGAACTGAACAACGATTACTTGAATGCAACAAGATTAATC
AAAAGTATGGGATCCTCCCTATAGTGAGACTC
GenBank Accession CR401146 [GenBank]
Graphic View Graphic view of gene At4g00335
Predicted Position of Insertion Chr4:146968 - go to primer design
BLAST e Value 2e-63
Hit Clone Code (BAC ID) F5I10
Hit Gene Code At4g00335 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING-H2 finger B1A
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g67150

 
Sequence (A. th genome BLAST matches underlined) 
>67-K025727-022-843-C09-8409
ATTGAATATATCCGGATAGTTTAAACCGAAGGCGGGAAACGACAATCTGATCCCCGGGTA
TGGGATCCTCCCTATAGTGAGAGGTTCAATGTGTATGGAAACGATTTCGGTTGGAGTAAA
CCAATAGCGGTTCGAGCTGGACCGGGAAATACCACCGATGGTAAACTCATTGCTTATCCG
GGGATCGAAGAAGGAAACATCGAGTTTCAGACGTGTTTATCGTCTAGTGTTTTGGAAAAA
TTATCGACTGATGAATAGTTTTTGAAGCATGTATGTGTTGTATAAGTAAAATCAACCAAA
TCAAATGTATGGGATCCTCCCTATAGTGAGANCCCCCCAANGGGGGGGACCCNAGGAAAT
TGCCTATGGGACCCCCCCTATAGGGGCCTACCCTTATTTGGTACTGACGGTGATAAATTA
CTATGCCGAATTCTTGAATATTACATAAAGTCGCAATCCATAAGAAGAATAACTTATATA
TTATTCTTAGTTCCTATTTTACAA
GenBank Accession CR401145 [GenBank]
Graphic View Graphic view of gene At5g67150
Predicted Position of Insertion Chr5:26796138 - go to primer design
BLAST e Value 2e-118
Hit Clone Code (BAC ID) K21H1
Hit Gene Code At5g67150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation HXXXD-type acyl-transferase family protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37