SimpleSearch - Line and FST details


Line specific information

 
Line ID 854B04
Vector Used pAC161
Line Availability available as T3 set from NASC (N481904)
Segregation Analysis 100:63:58
Confirmed for Hit At1g51880
Parent of DUPLO pair none
Parent of pair(s) 1187, 10731, 10738, 10741, 10746, 11447, 72932, 72966, 73030, 73059, 73119, 73145, 73173, 73199, 73226, 73245, 73268, 73318, 73358, 73420, 73438, 73469, 73483, 73496, 73519, 73529, 73540, 73550, 73558, 73573, 73583, 73587, 73590, 73592

Gene hit At1g51880

 
Sequence (A. th genome BLAST matches underlined) 
>57-K118834-0022-854-B04C-35St
TCCACTATCCTTCGCAGACCCTTCCTCTATATAGGAAGTTCATTTCATTTGGAGAGGACA
GGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTATCGTTGCATCTACACGCA
GAAACGAACCAGAAAAAATACAAAAGAAAAAAAAAAAAAAAAAAACCCCTTTTCCCTTTA
AAAGGGGGGGGGGGGGAAAAAAAAAAATTTTGGGAACCCAATTAAAGAACCCTTTTGGGG
GGGGGAAATTTTTTTGGTTCAGGGGAAAATTTCCCGGCAAAAAAAAAAGGGGTTCCCTTT
TCCGGGTTTAAAAAAAAAAATTTTAAAAAGGGTTTTGGTTAAAAAATAAAATCTTCTGGG
GGAGGGCCCCTTTTCCACCCCCCCCCAATTAAAAAAAATCCTTTTTGTGGGGACAATGGG
AAATTTAAAATTGGGGAATTTGTTCAAACCCCCGAAATTCCCCAAACAAAAGGGTGCCTT
AAAAAAAATTTTTCTTTTAAGGGGAAGGGTAAATTTG
GenBank Accession LN713443 [GenBank]
Graphic View Graphic view of gene At1g51880
Predicted Position of Insertion Chr1:19273281 - go to primer design
BLAST e Value 7e-26
Hit Clone Code (BAC ID) T14L22
Hit Gene Code At1g51880 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation root hair specific 6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR402327 [GenBank] LN713443 [GenBank]


Last Updated on 10.06.2021 13:37