SimpleSearch - Line and FST details


Line specific information

 
Line ID 855A08
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 9557, 96234

Gene hit At5g38317

 
Sequence (A. th genome BLAST matches underlined) 
>57-K025847-022-855-A08-8409
TGGGATCCTCCCTATAGTGAGACCTATGTGGAACGGGAGATTATTTAGCCGGGTATGGAA
TCCTCCCTATAGTGAGCCTTTTGGACTTGAATGTATACCCGCCAAATTATGAATTTCCAA
ATTAAAATATTTTGTTTATTGTTTCCGCCTAAAAATACAATGATTCGTATTTTGCCTTTT
AATGAAAATGAATTTTATTTTTATTTTAACCCTAAGAACATTTTAGTTTCCTTTTAAAAT
AGAAGATATTAAATTTATACTTTCATTAAGATATAGGTTAGGGAAACACCCCATATTTTG
AAAATAATAGTCATGGTTTTATAATTTTCAATAAAAATTTGCAAAAAACGGTATATTATA
TATTATGTATATCTTTCTAAGATAAATCCTTATGTAGAAAGCACTAAATTATTGTATTAT
TTTTCTTT
GenBank Accession FR816723 [GenBank]
Graphic View Graphic view of gene At5g38317
Predicted Position of Insertion Chr5:15313775 - go to primer design
BLAST e Value 2e-04
Hit Clone Code (BAC ID) MSI17
Hit Gene Code At5g38317 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation low-molecular-weight cysteine-rich 58
Insertion Classification 5' region
Confirmation Status unknown

Gene hit At1g49920

 
Sequence (A. th genome BLAST matches underlined) 
>57-K025758-022-855-A08-8409
ATTTACTCTTGAACTATATCATTGACAAGCATGCCGCCAAGCTGATAACTCAGGAACAGG
AGAAAATTTAGCCGAGTATGGGATCCTCCCTATAGTGAGACNTATTANTCNNN
GenBank Accession CR402437 [GenBank]
Graphic View Graphic view of gene At1g49920
Predicted Position of Insertion Chr1:18482086 - go to primer design
BLAST e Value 1e-15
Hit Clone Code (BAC ID) T18C15
Hit Gene Code At1g49920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MuDR family transposase
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37