SimpleSearch - Line and FST details


Line specific information

 
Line ID 859B06
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 12278

Gene hit At5g44410

 
Sequence (A. th genome BLAST matches underlined) 
>42-K025971-022-859-B06-8409
GNAGCCATTTACAATTGAATATATCCGGAACACATATATAGAATCGGAAATCTCCCTGAA
GAAAGTTATGCAAGGGAAACAAATTTGGCTATTTCAAATATCATTAACATATTTCATAAT
TGGTATACTTTGTTCATCACAAAAAAAATCCATTGGATCAACATTTGTTTTAACTCTCAC
CAATCTATCGAAATTGTTCTTGAAATACTTCACTCCCCAAACCTTTGCTTCCTCGTATGG
GATCCTCCCTATAGTGAG
GenBank Accession CR402929 [GenBank]
Graphic View Graphic view of gene At5g44410
Predicted Position of Insertion Chr5:17891191 - go to primer design
BLAST e Value 3e-74
Hit Clone Code (BAC ID) K9L2
Hit Gene Code At5g44410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FAD-binding Berberine family protein
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At2g04420

 
Sequence (A. th genome BLAST matches underlined) 
>42-K025970-022-859-B06-8409
TGAACCATTTACAATTGAATATATTTGGTTTCACATATATTGATATGGGAATCTCTGCCC
TATAGTGAGACCATGACCAAAGCTTGGAGTTCACTTTCCAAAGCATTATTCATTGTTCCT
CCAACTGCTTGTGCTGCTCCTTTATAGAATCCTTTGTCGTCTCTGATTANCCATCCTGAG
TTTGTTTGTTGTGTGCGGTGAATTGAAAGAGCCGTCATAGTTGCATTTAATCCATCCCAT
TGGTGGTTGTTCCCATTTCTGATGTGACGATTCCCGATTGTTGCANCCTTCTCTTACTGT
GTAATGATTCCCACTTTGGATATATTCTTGCGCATTCTCCCATTCTTGTATGGGATCCTC
CCTATAGTGA
GenBank Accession CR402928 [GenBank]
Graphic View Graphic view of gene At2g04420
Predicted Position of Insertion Chr2:1535965 - go to primer design
BLAST e Value 3e-139
Hit Clone Code (BAC ID) T1O3
Hit Gene Code At2g04420 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37