SimpleSearch - Line and FST details


Line specific information

 
Line ID 862H05
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 1981, 3064, 92392

Gene hit F7K9

 
Sequence (A. th genome BLAST matches underlined) 
>40-K025977-022-862-H05-8409
GNAGCCATTTACAATTGAGTATATCCTCTCCNAATCAAAGATCATAGCTCTAGCTTGAAG
TCTCGGGGAAGACCGTGACTGTGCTGACAATAATCAGAACCCATCTACACTAAGTAGAAT
ACCTGAAGACCTATTGGCAATCCCATCTCCCATCCTAATTAAGAACTTGACTCTACCCTT
TTGCATTCATAATCTTTTGAACTCTTTCTTAACCCATTCTTTTCTTTTTCTCTTAACTCT
AGGAGAAGCTTTTCTTTTCTCTTTGATACTTCTAGCGGGTTTGGCTTTCTTTAGTATGGG
ATCCTCCCTATAGTGAG
GenBank Accession CR403373 [GenBank]
Graphic View Graphic view of sequence CR403373 of line 862H05
Predicted Position of Insertion Chr2:3965369 - go to primer design
BLAST e Value 7e-29
Hit Clone Code (BAC ID) F7K9
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g28290

 
Sequence (A. th genome BLAST matches underlined) 
>40-K025976-022-862-H05-8409
GAATCAGATATCTTAGCTAACCTTGACCTCCCGATGGAGAATGTGACTGGCGTGCAAGTA
TTCAAGACCCATTAACAGTTGTATGGGATCCTCCCTATAATGAGCCCCCCCATCCCCCGT
CCTAATTAAAAACTTGATTCTACCCTTTTGACTTCATAATCTTTTCAACCCTTTCTTATC
CCATTCTTTTCTTTTTCTCCTAACTCTAGGACAACCTTTTCTTTTCTCTTTGATACTTCC
ACCGAGTTTTTGTTCTCTTGTATGGGATCCTCCCCCTATAGAGAGANCCNANNTCCATTG
TTCCTTGAGGACTCCTTTGGAACTCACTTTGTAGGTGTCCCCCACCCTAAATCTCCCCCT
AGGACAACCCTTCCTTTCCATGCAGGGGGGGTGCCTCCCGGCTATTTTTTCATTAAAACC
CAT
GenBank Accession CR403372 [GenBank]
Graphic View Graphic view of gene At5g28290
Predicted Position of Insertion Chr5:10280849 - go to primer design
BLAST e Value 3e-25
Hit Clone Code (BAC ID) T8M17
Hit Gene Code At5g28290 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NIMA-related kinase 3
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37