SimpleSearch - Line and FST details


Line specific information

 
Line ID 871B11
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 93864, 93865, 93866, 93868, 93869

Gene hit MBK20

 
Sequence (A. th genome BLAST matches underlined) 
>82-K026083-022-871-B11-8409
ATACTATCCTAGATATTGCGATGCTACCAAAGTTCCAATTCATAATTTGCGCAAACAACG
CAATCGTTGAAAATGGTAAAATTATGTGGCGTATGGGATCCTCCCTATAGTGAG
GenBank Accession CR404440 [GenBank]
Graphic View Graphic view of sequence CR404440 of line 871B11
Predicted Position of Insertion Chr5:2444824 - go to primer design
BLAST e Value 3e-31
Hit Clone Code (BAC ID) MBK20
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g68390

 
Sequence (A. th genome BLAST matches underlined) 
>82-K026117-022-871-B11-8409
ATGAAGCCATTTACATTGAATATATCCTGATAGTTTAAACGGAAGGCGGGAAACGACTAT
CTGATCCCCGGTGTATGGGATCCTCGCTAAAGGGAGCTATAGTGAGTCTTTTAGAACTTC
CTAATAAGGAGATTCCTAGAAAAGATAGTTAACAATTTGGAATTTTCTTCTCTCAAACGA
TCATGACGACTCTTTTTTCTTGGTCCATTCTTACACGCGGTCGTATGAATATAATTTTCT
ACTAGTAGGATTTTTAGAAAGTTATGGTATGGGATCCTCCCTATAGTGAGTTNNNNNTTT
CTTATGNNTTGGATTCTTTTTACTAATGATATTCCTGTTTGAAAATTACTCAATCACACT
CATAACATGTTTACAACAAGAGTACACAGATTTCGAAGATTCTAAAAATGTACCATAAAA
TTGGGGGTGTGAATTTATGTTCTTTTTTT
GenBank Accession CR404441 [GenBank]
Graphic View Graphic view of gene At1g68390
Predicted Position of Insertion Chr1:25644258 - go to primer design
BLAST e Value 1e-82
Hit Clone Code (BAC ID) T2E12
Hit Gene Code At1g68390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37