SimpleSearch - Line and FST details


Line specific information

 
Line ID 878B05
Vector Used pAC161
Line Availability available as T3 set from NASC (N484209)
Segregation Analysis 50:30:26
Confirmed for Hit At2g28660
Parent of DUPLO pair none
Parent of pair(s) 5233, 5235, 5284, 74602

Gene hit At2g28660

 
Sequence (A. th genome BLAST matches underlined) 
>34-K114415-0022-878-B05-8409
ATAGGTGATGATTTGGACCGAATGTACATCTCCTTAACAATAGCGCGAAGGACATCTTCA
CTTTTTGACGTTGAAATAAAATTGGTAACTACTCATTCTTTTTCTCCATATTGACCATCT
TTCTCTTCGTCTGTGACCAATGTTTCATCGCCGGCTCCATCCACTGATGACCAGGTTTGA
TTATTCTTCTTTAACCAAAGTATTTATTGTGTTTTCTTAACAACATGCATTATTCCATAG
AGTTTGAGACTAAAGATGATAGAAAGACAATTCACTAACCTGCCCGGCCGCTAAAANGTN
NTTNTTCTTGTCNNNGNTGGCNNGGTNTTTATCTTCNNCCNCNTCNTCTTCTTCTTCTTC
TTCNTCATCTTTCTCTTCTTCTGTGGACCANTGTTTCTTCGCCGGCTCCTTCCNCTGNTG
AGCNNGTTTGATTATTCTTCTTTNGCCCCCGTATTTTTTGTGTTTTCTT
GenBank Accession HE664997 [GenBank]
Graphic View Graphic view of gene At2g28660
Predicted Position of Insertion Chr2:12295720 - go to primer design
BLAST e Value 4e-84
Hit Clone Code (BAC ID) T8O18
Hit Gene Code At2g28660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Chloroplast-targeted copper chaperone protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g73360

 
Sequence (A. th genome BLAST matches underlined) 
>34-K026470-022-878-B05-8409
AGACCCGTCCTCAGGTAACAACAACACAAGATTCAAAATCTTCATACGTAAAGATTCATT
TGATAATGTATATATTGTTTCCTTCTTGTTTGTGGTACGGGATCCTCCCTATAGTGAG
GenBank Accession CR405385 [GenBank]
Graphic View Graphic view of gene At1g73360
Predicted Position of Insertion Chr1:27579556 - go to primer design
BLAST e Value 3e-40
Hit Clone Code (BAC ID) T9L24
Hit Gene Code At1g73360 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation homeodomain GLABROUS 11
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37