SimpleSearch - Line and FST details


Line specific information

 
Line ID 878D04
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 4403, 4418, 4443, 4640, 10030, 73623, 73635, 73647, 73648, 73649, 73650, 73651, 73652, 73653

Gene hit At5g55230

 
Sequence (A. th genome BLAST matches underlined) 
>28-K026470-022-878-D04-8409
CCTATTGCGAGTTTCGCCAGCTGGCGTATTACCGAAGAGGCCCGCACCGATCGCCCTTCC
CAACAATTGCACATCCTGAATGGGGAATGGGGCCTGATGCTTATATTTTCTCCTTACGCC
TCTGTGCGGAATTTCTGACCGCATGTGGTGCTCTCTCGATAAGGAATCGTCCCTAGATGA
TGATCAAAAAGCTCTCTTTCCTCATCAGGAGTATCCATCAGATTCCACAGGTCAATTAGC
TGAGTAGCCAGCTCTTGAAGCTGCAACAACAAAAGACAAAGATTCATTAATCCAAAAGCG
TAATTTATCAGAGACAATTTTAAGCAAATTAACGATGCAGAGTGTCTTTACCTTTTGAAG
TCTTTGCTTCGTATCATCTTGAGGATTCAAGACGGTTTTAGCCAACCTTGAAAGAGTCTC
ATTGCTAATGCTCTAAGGCTGAACACTGGTATC
GenBank Accession CR405410 [GenBank]
Graphic View Graphic view of gene At5g55230
Predicted Position of Insertion Chr5:22404087 - go to primer design
BLAST e Value 2e-134
Hit Clone Code (BAC ID) MCO15
Hit Gene Code At5g55230 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation microtubule-associated proteins 65-1
Insertion Classification CDSi
Confirmation Status unknown
Other FSTs Supporting this Hit CR405410 [GenBank]

Gene hit At1g66950

 
Sequence (A. th genome BLAST matches underlined) 
>28-K114414-0022-878-D04-8409
AGATTTCCGAATTAGAATAATTTGTTTATTGCTTTCGCCTATAAATACGACGGATCGTAA
TTTGTCGTTTTATCAAAATGTACTTTCATTTTATAATAACGCTGCGGACATCTACATTTT
TGAATTGAAAAAAAATTGGTAATTACTCTTTCTTTTTCTCCATATTGACCATCATACTCA
TTGCTGATCCATGTAGATTTCCCGGACATGAATGATTCGAAAATGTCGATGCTAACCTG
GenBank Accession HE665019 [GenBank]
Graphic View Graphic view of gene At1g66950
Predicted Position of Insertion Chr1:24983030 - go to primer design
BLAST e Value 9e-05
Hit Clone Code (BAC ID) T4O24
Hit Gene Code At1g66950 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pleiotropic drug resistance 11
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37