SimpleSearch - Line and FST details


Line specific information

 
Line ID 880B06
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 3517, 3562

Gene hit At2g46530

 
Sequence (A. th genome BLAST matches underlined) 
>42-K026472-022-880-B06-8409
AGGTAACTGAATCTTTGATAGAGCCGCTGAGAGCTTCTTTTAAGAGTCTATTAAGTTTTG
TCTTATTTGGATAGGGCAACCGAGGAGGCATTTACTTACAACCGGTTGGAGTATGGGATC
CTCCCTATAGTGAGTCNTATTACTCNN
GenBank Accession CR405649 [GenBank]
Graphic View Graphic view of gene At2g46530
Predicted Position of Insertion Chr2:19105957 - go to primer design
BLAST e Value 4e-43
Hit Clone Code (BAC ID) F13A10
Hit Gene Code At2g46530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation auxin response factor 11
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At5g44230

 
Sequence (A. th genome BLAST matches underlined) 
>42-K026526-022-880-B06-8409
AGCCATTTACATTGAATATGCCCTGTATTACATATTGAGTCTTCATATTGTAGCTTTGAT
ATTTCTGTTAGGTATGGGATCCTCCCTATAGTGAGTCTTGTCATACCTGGATAGGGCAAC
CGAGGAGGCATTTACTTACAACCGGATTGGAGTATGGGATCCTCCCTAGAGTGAGACACA
TTCCTCTAGTTGGGTTGAAGATAAGAATGGTCAGATGCATAAGTTTTTCCCTGGAAACCT
GAACCATCCAATGTCAAATAAGATTCAAGACAAGTTAGAAGAGCTTGTAGAAAGATTAAC
GGTATTAGGATATCAACCGGATTTGAGCTCTGTGCCATACGACGTGAGTGACAATGCGAA
GAGGTTGATACTGATACAGCATACCGAGAAGCTAGCTTTAGCGTTCTCTTTACTCACTAC
GAACAGAGATTCTACGATAACAATAATGAAGAATTTGAGGATGTGCCTAGATTGTCACAA
GTTTATGCGTTTGGCATCAGAGGTCACAGGGAAGGTAATTATA
GenBank Accession CR405650 [GenBank]
Graphic View Graphic view of gene At5g44230
Predicted Position of Insertion Chr5:17815755 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MLN1
Hit Gene Code At5g44230 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pentatricopeptide repeat (PPR) superfamily protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37