SimpleSearch - Line and FST details


Line specific information

 
Line ID 887F04
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 959
Note

Gene hit F3A4

 
Sequence (A. th genome BLAST matches underlined) 
>30-K030271-022-887-F04-8409
TATCCGCCCGATACAGACATTGACCATTAATTATATTTGTCACCTTTCGGTTTCAAGCAT
CGATGATTACAAGTGAAAAGATTTTTTTTTTTTTTTTTTTTTCGCAGAGAGGGGGGGGCC
CCCCCTTTTGGGGGGATTTTTCTTCTTGTCGTTTTTTGTTTTTCTTGGATTTGTGTTTTT
TTGTGTTTTGTTTTTTTTAACTGTTCTTATGATTTGTTTTTTTTTTTTTTATTTGTTTAA
TTTTTTAGGTTTTGGATATGGAAAGAGATTTTTTTACTATGTAAGAGTTTGTTTTTTTGA
TAGGTCCAAAAAGAGTAATTAATGATTATTTTGAATTGAGATATATACTAAAATTGTATA
CATTGTAAGGAAGAAAGATGCTGAATAAGGGGTAAATGATATTTGCGCTTATATGTAAGT
GTCAAAGA
GenBank Accession CR935282 [GenBank]
Graphic View Graphic view of sequence CR935282 of line 887F04
Predicted Position of Insertion Chr3:18567157 - go to primer design
BLAST e Value 5e-27
Hit Clone Code (BAC ID) F3A4
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g60750

 
Sequence (A. th genome BLAST matches underlined) 
>30-K113983-0022-887-F04-8409
TGCTTTAAAGTTGCCTTGATGACTTAATGTTTGACTTGCACTTCTCTGACAAGCCAGGCC
GCTATAATGGAAAAAAAAATGTTCGTTGTATAAAGTAACCGATACGGCTGCGCGCCTAAG
TTGGTGTGTTATTCCGCCCTGTCGAGCATGACGAGGAGCCTGTGATGATGGGGCTAAATC
ACAAAAGCAAAAACA
GenBank Accession HE665225 [GenBank]
Graphic View Graphic view of gene At3g60750
Predicted Position of Insertion Chr3:22455265 - go to primer design
BLAST e Value 6e-13
Hit Clone Code (BAC ID) T4C21
Hit Gene Code At3g60750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transketolase
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37