SimpleSearch - Line and FST details
Line specific information
| Line ID | 888H06 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 75308, 75311, 75313, 75314 |
Gene hit At1g49630
| Sequence (A. th genome BLAST matches underlined) | >48-K113050-0022-888-H06-8409 ATTGTACATGTGTAACTTTAAAAAAAAAAAAAAGAAATCCCGCTTTCGCCGTTTTTTACC ACAGTATCGTAGTTTGGCGTTTTATTGGCCGTACTTTCCCCCGCCAAAAAACGCCGCGGA CGGCCCCCTTTTTGAAAAGAAAAAAAATTGGTGATTACTCTGTCATTTTCTCCCCCTTGT TTGGCAAACTCACTGCTCACCCATGAAGATGGCCCTGACATGAGGCCTTTTACTATTGAA TATATCCAGATAATTGTACATGTGTGACTTTAAAAAACCGGCCCCCAGGCCCCCCCCCCA AAAAAAATGGAACGTTTTTAACCCCCGCCCTTTTTCCCCCCCCGCCCCCCCCAAAAAAAA AAAAAAAAAGGGCCCCCTTTTTTTTAAAGGGAAAAAACCGTTTTGGGGGGGAAAATTTTT ACCCCCTTTTTGGGAGTTTTCCAATCCCCCGGAAAACCCGGGATTTAAATTGGTTTTTTT GGTGGGCCCCTTAAAAAAACCCCTTTAATTTGTTGGTTTTTTNGTTTCCCCCCCCCGGGG GGGCCCCCCAAAAAAAAGGAAGGGTTTTAAACCCTTTTTTTTTCCCCCCCCCCCCCCCCC CAAAAAAAAA |
| GenBank Accession | FR817269 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:18367677 - go to primer design |
| BLAST e Value | 0.036 |
| Hit Clone Code (BAC ID) | F14J22 |
| Hit Gene Code | At1g49630 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | presequence protease 2 |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR817268 [GenBank] FR817269 [GenBank] |
Gene hit At3g25030
| Sequence (A. th genome BLAST matches underlined) | >48-K112302-0022-888-H06-8409 NGTCGTATTCGGATGAGCCATTTACATTGAATATATCCTGTAATAACGCTTACCCGTTAC CACCAATCGTGGTCCTCTTCTGCTCGTACACACTCTTTTTATATAATCTCTTTCTTTCAC ATAAAGAGAAAGCGGAATAAAAAGTGTTCAAGAGCTCATAACATCAAGAAAAAGTATATA CATTCTTCTGTATATCTCTGAGAAATATTATGATTGTTGTCTGACATTGAACTTTTTAAA AAGAAAAAAATCATAAACTTCTCTCTGATAAAGCCAGAATCTTATATTATAAAGTATATT CTATTCATTACAGATCTGCTCTTGGATTTCGGATTCTCCTGCAAACGTAAAGACGAAGGT GTTTTATCTCTTCACTGCAAAAAAAACTCTTGAATTTTATGGTTTTCTATAGAGCTGAAA TAGTAAACGAGTCTTGACAAAAAAAAAAGTCCGTTTTCTTTCCAAAGGTTTTGGGGGAAG CGAAATTTTATTCTTAACCCCCTATATAAAAAAATTTTAAATCAAACCGGCCCGGCC |
| GenBank Accession | FR817267 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:9122105 - go to primer design |
| BLAST e Value | 2e-177 |
| Hit Clone Code (BAC ID) | K3G3 |
| Hit Gene Code | At3g25030 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RING/U-box superfamily protein |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | CR935333 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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