SimpleSearch - Line and FST details
Line specific information
| Line ID | 890E01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N485393) |
| Segregation Analysis | N/A (line seemingly not resistant, T2 plants grown without drug) |
| Confirmed for Hit | At3g58120 |
| Parent of DUPLO pair | 940 |
| Parent of pair(s) | none |
Gene hit At3g58120
| Sequence (A. th genome BLAST matches underlined) | >05-K117890-0022-890-E01-8409 TTTGGTTATTGACTTTCTCCTACAAGTACAACGGATCGTCCTGTGTCATTTTATCAAAAT GTGCTTTCATTTAACAATAACGTCTGCGGACATCTACATTTTTGAATTGAAAAAAAATTG GTAATTACTCTTTCTTTTTCTCCATATTGACCATCATACTCATTGCTGATCCATGTAGAT TTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGGAATACATGGAACTAACCAGC CCGGCCGCTAAAAGGCATTAATAAGGTTCGCAAATGAAATATATATTGTCCTGCTTGAAT AGATTTANTAAGGTTTATAAATATCTATAGCTAATTATTTTATAACATGGACCTAACCAG CCCGGCCGCTAAAAAAAAANNNNNNTNGGGGGGGGGGGGGGGAAAAAAAAAAGAAAANAA CNGAAAAGAGGAAAGGAGANAAAATGAAAAAAANNTNNCCACTAAAATAAATAAGTAAAA CTNGGGACCCGAGCCAGAAAAAGAAGAAGAATGGAATTTTTA |
| GenBank Accession | HG968210 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:21522006 - go to primer design |
| BLAST e Value | 3e-32 |
| Hit Clone Code (BAC ID) | F9D24 |
| Hit Gene Code | At3g58120 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Basic-leucine zipper (bZIP) transcription factor family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | HG968209 [GenBank] HG968210 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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