SimpleSearch - Line and FST details


Line specific information

 
Line ID 892H04
Vector Used pAC161
Line Availability available as T3 set from NASC (N485624)
Segregation Analysis 50:46:46
Confirmed for Hit At3g19500
Parent of DUPLO pair 2514
Parent of pair(s) none

Gene hit At3g24740

 
Sequence (A. th genome BLAST matches underlined) 
>32-K030260-022-892-H04-8409
GNAGCCATTTACAAGTGAATATATCCTGTCGTGCTCTATTGGTCACGCGGGTGACCTAAA
GGAGGCTACGGGGTTATGAGACTCGGTATGGGATGCTCCCTATAATGAGTCGTATTACTC
CTCTTCCTCTTCGGACATCGCTGCGGACATCTGTGTTTTCCCTTCGAAAAACCCCTTGAT
TTTTCTCCTTTTTTTACCCCGACGCTTCAGCTTATCGCGGATGATTTCCGCTTGATCTAC
GACTTCCAAATCTCCTTCTTCTTCGTGGAACAAGAGTAGAANCACCGCCTGCATCATTCT
GCAAACGAAACTCTTCTTCATCGTTGTTCTTGCACTCAACATGTAGAAACAATAGATTCT
CCCCCCA
GenBank Accession CR935551 [GenBank]
Graphic View Graphic view of gene At3g24740
Predicted Position of Insertion Chr3:9033640 - go to primer design
BLAST e Value 1e-61
Hit Clone Code (BAC ID) K7P8
Hit Gene Code At3g24740 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation cellulose synthase, putative (DUF1644)
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At3g19500

 
Sequence (A. th genome BLAST matches underlined) 
>32-K030276-022-892-H04-8409
CCCGGACAGNAGCCATTTACANTTGAATATATCCTGAACGGCTCTATCTAGGTCACGCCA
TTGAACCAAAGGAGGACCACGCGTGTATAAACTCCCTATGAAATCCTCCCTATAATGCGT
CTTATTACTCATCCCCCTCTTCGAACACCCCCCCACACATCCCCATTACCCTTTCCAAAT
CTCTTCTTCTTCCNACACACTCACAATAAAAAACACATCTTTAAGTTTGTAATCCTTAAT
TACATGCAACTATGCAAATAAAAAATCANTAATGAGAGACTTACGGTTGATGATTTAGTA
GenBank Accession CR935552 [GenBank]
Graphic View Graphic view of gene At3g19500
Predicted Position of Insertion Chr3:6760292 - go to primer design
BLAST e Value 4e-46
Hit Clone Code (BAC ID) MLD14
Hit Gene Code At3g19500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37