SimpleSearch - Line and FST details
Line specific information
| Line ID | 903C05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N486621) |
| Segregation Analysis | 50:47:31 |
| Confirmed for Hit | T32N15 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 8986, 97600 |
| Note |
Gene hit At4g36170
| Sequence (A. th genome BLAST matches underlined) | >35-K030002-022-004-C05-8409 TGCATATTATTCCCTCATTTTTCACTTACAAAGTATGGGATCCTCCCTATAGTGAGTCGT ATTACTCACGGGGTTGGGGGACCCCCGCTGCGGGGGGCGGTGGGGACCTGTGGGGGGGGG GGTGGAGGGGGGGGTGGGGGGGGGGGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTAGGGGGTGTTGGGGTGGGTGGGGGGTGGG GGGGGGGGGGTGTTGGGGAGGGGGGGGGGGGGGGCGTGGGGGGAGGGGGGGGGGTGGGGG TGGGGGGGGGNGGGGTGAGGGGGG |
| GenBank Accession | FR799842 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:17116814 - go to primer design |
| BLAST e Value | 3e-07 |
| Hit Clone Code (BAC ID) | F23E13 |
| Hit Gene Code | At4g36170 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein |
| Insertion Classification | CDSi |
| Confirmation Status | failed, line belongs to a contamination group, please check line 180B08 |
Gene hit At1g55240
| Sequence (A. th genome BLAST matches underlined) | >35-K114332-0022-903-C05-8409 ATTAGAATAATTTGTTTATTGGCTTTCGCCTATAATACGACGGATCGTAATTTGTCGTTT TATCAAAATGTACTTTCATTTTATAATAACGCTGCGGACATCTACATTTTTGAATTGAAA AAAAATTGGTAATTACTCTTTCTTTTTCTCCATATTGACCATCATACTCATTGCTGATCC ATGTAGATTTCCCGGACATGAAGCCATATCCATGGAGCTCTTCATTGGACCTAACCTG |
| GenBank Accession | HE665624 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:20604975 - go to primer design |
| BLAST e Value | 1e-07 |
| Hit Clone Code (BAC ID) | F7A10 |
| Hit Gene Code | At1g55240 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | proteinase inhibitor I4, serpin (DUF716) |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
Gene hit T32N15
| Sequence (A. th genome BLAST matches underlined) | >02-K125675-0022-903-C05C-8409 TCATTTATGTTAACAACCACAAAATAAGATTGCATATAATTCAGTTAGATCAAAAATTAA AATATCATAAATGAGCCCCATCTAAAATGTAGATGTCCGCAGCGTTATTAT |
| GenBank Accession | queueing for submission to ENA/GenBank |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:16320989 - go to primer design |
| BLAST e Value | 3e-42 |
| Hit Clone Code (BAC ID) | T32N15 |
| Insertion Classification | Genome Hit |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
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