SimpleSearch - Line and FST details


Line specific information

 
Line ID 903G11
Vector Used pAC161
Line Availability available as T3 set from NASC (N486675)
Segregation Analysis 50:50:50
Confirmed for Hit At4g34660
Parent of DUPLO pair none
Parent of pair(s) 1719

Gene hit At1g08300

 
Sequence (A. th genome BLAST matches underlined) 
>87-K030002-022-004-G11-8409
ACTTTAGACATCCTGATTATATTTTCGTCTATCAGTTACAATATTATGAAAATTATATAG
TTACAGATGCTAAATCAAAAACGGTATGGGATCCTCCCTATAGTGAGAANGGGAGCGGGC
GTATANTGAG
GenBank Accession FR799862 [GenBank]
Graphic View Graphic view of gene At1g08300
Predicted Position of Insertion Chr1:2614760 - go to primer design
BLAST e Value 3e-28
Hit Clone Code (BAC ID) T23G18
Hit Gene Code At1g08300 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation no vein-like protein
Insertion Classification 5' region
Confirmation Status unknown

Gene hit At4g34670

 
Sequence (A. th genome BLAST matches underlined) 
>87-K114331-0022-903-G11-8409
AATTAGAATAATTTGTTTATTGCTTTCGCCTATAACTACCACGGATCGTAATTTGTCGTT
TTATCAAAATGTACTTTCATTTTATAATAACGCTGCGGACATCTACTTTTTTGAATTGAA
AAAAAATTGGTAATTACTCTTTCTTTTTCTCCATATTGACCATCATACTCATATGCTGAT
CCATGTAAATTTCCCGGACATGAACCCGTTTCTAATTGAATTGGTATTTCTAACCAGCCC
GGCCGCTATTNNNCGNGTTCGNNGGCGTGGTNTTTGTTCTNGCGCTCTCTCCNTTTTTGG
CGATTTAAAATCTCTGTCTTCTCTGAGTTGTTCCCNGTAATCGGAGGGAACTCGTAAAGT
GGAAGAATACGAGAAAGAGAGAAGGAAGAAAATTTGTGAATAACTCTTGATCTGGTGAAG
AATGGATGCAATTANAAAACAAGCTAACCTGCCCGGCCGC
GenBank Accession HE665675 [GenBank]
Graphic View Graphic view of gene At4g34670
Predicted Position of Insertion Chr4:16548733 - go to primer design
BLAST e Value 1e-60
Hit Clone Code (BAC ID) T4L20
Hit Gene Code At4g34670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal protein S3Ae
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Other FSTs Supporting this Hit HE665676 [GenBank]


Last Updated on 10.06.2021 13:37