SimpleSearch - Line and FST details


Line specific information

 
Line ID 910B06
Vector Used pAC161
Line Availability available as T3 set from NASC (N487282)
Segregation Analysis 50:50:43
Confirmed for Hit At2g24290
Parent of DUPLO pair 7934
Parent of pair(s) none

Gene hit At3g41768

 
Sequence (A. th genome BLAST matches underlined) 
>42-K101834-0022-910-B06-8409
TTTGAGCAACAATGCTTGAGCTCTCCTCCCGAGGGGAGCCTCCCGTATAGGGAGGGGGAT
TAATTAAGTCACTGTTTAGTGACTTCTTCACAGTCTACTCTGACGAGTTTCTCAATGGAA
GCAAACTATGGGATCCTCCCTATAGTGAGACGTATTGGTCAGGCCACTATCGGGCCATCG
AAAGTTGATAGGGCAGAAATTTTAATGATGCGTCGCCAGCACAGAGGCCATGCGATCCGT
CGAGTTATCATGAATCATCAGAGCAACGGGCAGAGCCCGCGTCGACCTTTTATCTAATAA
ATGCGTCCCTTCCATAAGGGGGGGTTTGTTGCACAAATTAGCCCTATGGGGACCTCCCTA
TAGT
GenBank Accession CU458023 [GenBank]
Graphic View Graphic view of gene At3g41768
Predicted Position of Insertion Chr3:14198179 - go to primer design
BLAST e Value 8e-74
Hit Clone Code (BAC ID) F21A14
Hit Gene Code At3g41768 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation rRNA
Insertion Classification TS2TE
Confirmation Status unknown
Other FSTs Supporting this Hit CU458023 [GenBank]

Gene hit At2g24290

 
Sequence (A. th genome BLAST matches underlined) 
>42-K104933-0022-910-B06-8409
CATTGTAGATTTCTTGGAGAACAATGCTTGAGCTCTCTCTCTATGGGATCCTCCCTATAG
TGAGACNNNNNNNNNGGGGGATCCCCCACTTTTTTTTATTTCCAATTTTATGGTGTTTTG
TTTATGCCTTGTTNGTGGGGGGNGTATTNNNNCCNNNNNGGANNNNNAAGTTATAAATTG
TANAGGCGTNACGTGTANNNAAAGGCAAAAGAAAGNGAAGANANNNGATNNNCNNGNGNN
NNGAAGAGGNNNANGGNNNNNNGNNNNGAGGGGNNNNNNNNNNNNNNNNNNNNNAANNNN
NNNNNNNNNNNNGAGNANNNNANANNNNGNNNNNNAANNNNNNNNNANNNNANANNNNNN
NNNNNNNNNNNNNNNNNNNNANNNNNGTNNNNNNNNNANNNNNCAGGNNGNNAAAAAAGN
AAANNNNANCNNNNGNAATGGGNNNGTGGTTNNNGAAAACGNAGTAANNNGAAAAAANAG
AAAGAANGAGGGAANNNAAAAACAGGAGAGAGGGGNGGAGGGNAGCAGGAAATATACGAG
CATGAAAGAGATAGAATATATAATAAAGAAGG
GenBank Accession FR817776 [GenBank]
Graphic View Graphic view of gene At2g24290
Predicted Position of Insertion Chr2:10339794 - go to primer design
BLAST e Value 6e-04
Hit Clone Code (BAC ID) T28I24
Hit Gene Code At2g24290 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ubiquitin-associated protein (DUF1068)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37